Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01196 ATGGTGGCCGTCGATTCGGTTCAGTGTTTTGGGCGCAAAAAAACCGCTGTTGCAGTGACTCACTGCAAGCGAGGTAGGGGCCTGATCAAGATCAATGGGTCCCCCATCGAGCTCGTTGAGCCGGAGATCCTCCGCTACAAGGCCTACGAGCCAATCCTCCTGCTCGGTCGTCATCGCTTCGCCGGGGTCGACATGAGGATTAGGGTTCGCGGAGGTGGTCACACTTCGCAGATCTACGCCATCCGCCAGAGCATCGCCAAGGCCCTCGTGGCGTACTACCAGAAGTACGTGGACGAGCAGTCCAAGAAGGAAATCAAGGACATACTCGTTAGGTACGACCGGACCCTCCTCGTCGCTGATCCGAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGCGGAGCTCGCGCTCGTTTCCAGAAGTCTTACCGTTAA 432 0.5833 MVAVDSVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILRYKAYEPILLLGRHRFAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01196 143 Gene3D - 2 143 IPR014721 -
Eupl03g01196 143 PANTHER RIBOSOMAL PROTEIN S9 5 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
Eupl03g01196 143 SUPERFAMILY Ribosomal protein S5 domain 2-like 6 143 IPR020568 -
Eupl03g01196 143 ProSitePatterns Ribosomal protein S9 signature. 71 89 IPR020574 GO:0003735|GO:0005840|GO:0006412
Eupl03g01196 143 FunFam 40S ribosomal protein S16 1 143 - -
Eupl03g01196 143 Pfam Ribosomal protein S9/S16 11 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01196 Eupl-Chr3 36588867 36595326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01196 3 143 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.652 1.04e-92 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01196 K02960 - nnu:104601738 278.87