Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl03g01195 | ATGGGTCGGAAGAAGCCCACCGCTCGTGACGACGAGAACCCTACTGCTGCATCTCAGGTTGGAACCACCAAATCCAAGAAGAAAGGCCGTATCATCGATGATGACGAATACGCTATCGGGACAGACTTGTCCGAGGATCAACCAAAGGAGAGCCAAGAAGAGGAGGCCGTGCCCGTTGTCGGGAAGAAGAATGGCAATAAATTAGTACAACTTAAAGACGAAGACCTCGAAGAAGAGGAAGACGATGCTCCCCCAATTGTCTTCTCCGGTAAGAAGAAGTCAAAATCCAAGAAGAGTGGTAACAGTTTGTTTAGCGCGTCTACTTTCGATGCCCTGGAAGAGGAGGAGGAAGATGGGCATAAAGGGAATGATGTTGGGGAAGAGGGAGATGAAGCTCCTGTGGTTTCTTTTTCTGGTAAGAAGAAGTCATCGAAATCTTCAAAGAAAAGTAATAGCTTGTTTACTGCTTCTGCTTTTGATGCCAGTCTTGATGAAGGAGATGGAATTGATACTTCCGCTGAATCCGAACTGCAACCCATGGATGAAAATAAAACTGAGAATGAAGATGCTCTGGCCATTGCCTTCACTGGGAAGAAGAAATCTTCTAAGAAGGGTAGTAGTTCGTTTGCAACCTCTAGTTTTGATGCTTTTGATGAAGGGGATGACAAGGATGAAAATAAAGGGGAGGAGGAAGATGCCCCTGTGATTACTTTCTCTGGTAAGAAGAAGTCGTCGAAATCTTCCAAGAAGAGCAATAGTTTGTTTGCTGCGGCACTCCTTGATGAACAGGATGACAACAATGTTTCTATTGCTGAACAGAAACTCACCACAAGGTCTGGTGATGATTCTATTGATGAAAGCAGGGAGGAGAATGAAGAGGCTGTGACGATTACTTTTTCTGGTAAGAAGAAGTCTTCGAAATCTTCCAAGAAGAGTAATATCGGCCTTGGAGATGAAGTTACTGATGCGACCGAACCCGAACAACCTTCTGTTGGAGGCAGTAGTAATGACGCTGATGGAAACAAAACCATTGATGCCAAAATTAATGAACAGGGAAGCGATGATGTTGTGCAGACTTCTAAGAACAAAAGGAAGAAGAAGAAGAGTGGGAGGACTGCCCAAGAGGAGGATGACTTAGACAAAATTCTCGCTGAGCTGGGTGAAGGCCCACCTCCTCTGAAAACTTCTGCTCCTCCTCCCCAAGAGGAGAAGGTTCAACTTCAGCCTGAACCAGTTGGCTCAGTTGATGCTATGGGTGAGGAGAAGGAAGCTGAAGCAGAAACTGGGGAGTCGGCGGCTTCAAAGAAGAAGAAAAAGAAGAAGGAAAAGGAAAAAGAGAAGAAGGCAGCAGCAGCTGCTGCGGTGGAGGTAAAGGAAGAAAAACAGGAGGAAACAAAGAGTAAAGTGTCCGACAAGAAGATCCCAAAGCATATCAGAGAAATGCAGGAGGCACTGGCAAGGCGTAAAGAATCTGAGGAGAGAAAGAAGAGAGAAGAAGAGGAGAGGTTGCGGAAGGAAGAAGAGGAGCGTCGCCGGCAGGAGGAGGTCGAGAGGCAGGCGGAGGAGGCCAGGCGCAGGAAAAAAGAGAGAGAGAAGGAGAAGCTTCTGAAGAAAAAGCAGGAAGGCAAGCTCTTAACGGGTAAACAGAAGGAAGAAGCCCGTCGGTTGGAAGCAATGAGGAATCAGTTTCTTGCTCAGAGTGGTGCGCTTCCCATTGCAGACACTGGCAGTGTGACAGCAAAACGGCCGAAGTACCAAACAAAGAAGGCTAAGCCGGCTCCGGCACAAGCAAATGATGGTGCCCCTGTAAAGGCTGTGGACAATGTAGAGGCATATGAAAACCAGCAGGAGGCTGCAGTTGAGGCGGGCACATCAGAAGTTGAGAAGGTCAAACAAATGGAGTCAACAGCAGGGGATGCTGAGGAGAAATTGGAAGTTGAGCATGAGCTTGAAGAGAACGGAGTCGAAGAAGAAGAAGATGATGAAGAATGGGATGCGAAGAGCTGGGATGATGCTGTTGTGAACTTGCCTGTTAAGAGTGCTTTTGCCGAGGAAGAGGCCGAGTCTGATCCTGAGTCTGTGCCTGTGCCTATGGTGAAGAAAGAGATCAAGCGTATCACAGCACCGGCTTCTGGCAGTGCAGGAGCGCCTCCTGTGGCAGCCAAACCCACTGTTGCTGCCAAGAAAGTTGTTATTCCCCCAACTACAATAACTCAGGATGTTGAAAGTAAAGAGGACCAACATGAGGTCGATGTTACAGAAAAGAATAGGAGAAAGGAAGCTGCAATGAAACGGGAAGCACGGGTTGCAGAGGCTTTATCAAAAAGGAGTGCCAATAACCTCCGTTCTCCAATTTGTTGTATTATGGGTCACGTTGATACTGGTAAAACCAAGCTGTTAGATTGCATCAGAGGTACTAATGTCCAGGAAGGTGAGGCTGGAGGCATTACACAGCAGATCGGGGCGACCTATTTTCCTGCAGAGAACATACGGGAGAGAACCAAGGAGCTCAAAGCTGATGCAACGTTGCGGGTCCCTGGTCTTCTGGTCATTGATACCCCGGGACACGAATCATTCACGAATTTACGGTCACGAGGATCCGGTTTATGTGATATTGCAATTTTGGTTGTTGACATAATGCACGGATTGGAACCACAGACAATTGAATCGCTGAATCTTTTGAAAATGCGGAATACGGAGTTTATAGTTGCGTTGAATAAGGTGGACAGATTATATGGTTGGAAGACTTGCCCCAACTCACCTATTGTGAAAGCTATGAAGCAGCAGTCAAATGATGTACAAAATGAGTTCAAAATGAGGCTCACCCAGATCGTCACACAATTCAAGGAGCAGGGTCTGAATACTGAATTGTACTATAAAAATAAAGAAATGGGGGAAACCTTCAGTATTGTACCTACAAGTGCAATCAGTGGTGAAGGCATTCCGGATCTGCTACTGTTATTGGTGCAGTGGACTCAGAAAACTATGGTGGAAAAGCTTATGTTTAGCAACGAAGTGCAGTGCACAGTGTTGGAGGTTAAGGTTATTGAAGGCCTAGGGACAACCATTGATGTTGTATTAGTTAATGGTATGCTTCATGAGGGAGACCAAATAGTTGTTTGTGGCATGCAGGGGCCTATTGTTACCACAATCCGTGCCTTACTGACCCCTCACCCGATGAAGGAGCTTCGAGTAAAGGGATCTTATCTGCATCATAAAGAGCTCAAGGCTGCACAGGGTATCAAGATCACTGCCCAGGGCCTTGAAAATGCCATTGCAGGTACTGGTCTATATGTGGTTGGGCCCGAGGATGAGCTAGAAGACATCAAGATAGCAACGATGCAAGACATGACGTCAGTCATGAGCAGGATTGACAAGAGTGGGGAAGGTGTGTGCGTGCAAGCATCTACGCTTGGGTCACTGGAAGCTTTGTTGGAGTTCTTGAAGAGCGATGCAGTGAAGATTCCCGTCAGTGTTATAAATATAGGCCCTGTACACAAGAAGGATGTCATGAAGGCCAGCGTCATGCTGGAGAGGAAGAAAGAATATGCTACCATCTTGGCATTTGATGTCAAAGTGACACCTGAGGCTCGCGAGCTTGCAGATGAGACTGGTGTGAAGATATTCATTGCAGATATCATTTATCACTTGTTTGATCAGTTCAAGGCTTACATTGACAATCTCAAGGAAGAAAAGAAGAAGGAAGCTGCAGAAGAAGCAGTCTTTCCATGTGTTCTCAAGATCATGCCAGACCACGTTTTTAACAAGAAGGACCCAATTATCTTGGGGGTTGATGTTCTTGAAGGCATTGCTAAGGTAGGCACTCCAATGTGCATTCCTTCAAGGGATTTTATTGATATAGGACGGGTTGCATCCATTGAAATTAACCACAAACAGGTTGATGTAGCCAAGAAAGGTCAGAAGGTGGCCATAAAGATAGCTAGCACCAATGCCGATGAGCAGCAAAAGATGTATGGCAGGCATTTTGAAATCGATGATGAGCTTGTTAGCCACATTTCTAGGAAGTCTATAGATATACTGAAAGCTAATTATCGGGAAGATCTGTCTAATGAGGAGTGGAGGCTAGTTGTGAAGCTGAAGAATCTCTTCAAGATACAATAA | 4122 | 0.4605 | MGRKKPTARDDENPTAASQVGTTKSKKKGRIIDDDEYAIGTDLSEDQPKESQEEEAVPVVGKKNGNKLVQLKDEDLEEEEDDAPPIVFSGKKKSKSKKSGNSLFSASTFDALEEEEEDGHKGNDVGEEGDEAPVVSFSGKKKSSKSSKKSNSLFTASAFDASLDEGDGIDTSAESELQPMDENKTENEDALAIAFTGKKKSSKKGSSSFATSSFDAFDEGDDKDENKGEEEDAPVITFSGKKKSSKSSKKSNSLFAAALLDEQDDNNVSIAEQKLTTRSGDDSIDESREENEEAVTITFSGKKKSSKSSKKSNIGLGDEVTDATEPEQPSVGGSSNDADGNKTIDAKINEQGSDDVVQTSKNKRKKKKSGRTAQEEDDLDKILAELGEGPPPLKTSAPPPQEEKVQLQPEPVGSVDAMGEEKEAEAETGESAASKKKKKKKEKEKEKKAAAAAAVEVKEEKQEETKSKVSDKKIPKHIREMQEALARRKESEERKKREEEERLRKEEEERRRQEEVERQAEEARRRKKEREKEKLLKKKQEGKLLTGKQKEEARRLEAMRNQFLAQSGALPIADTGSVTAKRPKYQTKKAKPAPAQANDGAPVKAVDNVEAYENQQEAAVEAGTSEVEKVKQMESTAGDAEEKLEVEHELEENGVEEEEDDEEWDAKSWDDAVVNLPVKSAFAEEEAESDPESVPVPMVKKEIKRITAPASGSAGAPPVAAKPTVAAKKVVIPPTTITQDVESKEDQHEVDVTEKNRRKEAAMKREARVAEALSKRSANNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLRVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCPNSPIVKAMKQQSNDVQNEFKMRLTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLMFSNEVQCTVLEVKVIEGLGTTIDVVLVNGMLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGSYLHHKELKAAQGIKITAQGLENAIAGTGLYVVGPEDELEDIKIATMQDMTSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSVINIGPVHKKDVMKASVMLERKKEYATILAFDVKVTPEARELADETGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKIMPDHVFNKKDPIILGVDVLEGIAKVGTPMCIPSRDFIDIGRVASIEINHKQVDVAKKGQKVAIKIASTNADEQQKMYGRHFEIDDELVSHISRKSIDILKANYREDLSNEEWRLVVKLKNLFKIQ* | 1374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl03g01195 | 1373 | CDD | aeIF5B_II | 1005 | 1114 | - | - | |
Eupl03g01195 | 1373 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 374 | 1370 | IPR015760 | - | |
Eupl03g01195 | 1373 | PRINTS | GTP-binding elongation factor signature | 865 | 876 | IPR000795 | GO:0003924|GO:0005525 | |
Eupl03g01195 | 1373 | PRINTS | GTP-binding elongation factor signature | 785 | 798 | IPR000795 | GO:0003924|GO:0005525 | |
Eupl03g01195 | 1373 | PRINTS | GTP-binding elongation factor signature | 849 | 859 | IPR000795 | GO:0003924|GO:0005525 | |
Eupl03g01195 | 1373 | PRINTS | GTP-binding elongation factor signature | 901 | 910 | IPR000795 | GO:0003924|GO:0005525 | |
Eupl03g01195 | 1373 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 776 | 1072 | IPR027417 | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 278 | 297 | - | - | |
Eupl03g01195 | 1373 | FunFam | eukaryotic translation initiation factor 5B | 1004 | 1123 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 26 | 57 | - | - | |
Eupl03g01195 | 1373 | Coils | Coil | 641 | 661 | - | - | |
Eupl03g01195 | 1373 | FunFam | Eukaryotic translation initiation factor 5B | 1236 | 1373 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 574 | 602 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 200 | 214 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 614 | 667 | - | - | |
Eupl03g01195 | 1373 | NCBIfam | small GTP-binding protein domain | 786 | 910 | IPR005225 | GO:0005525 | |
Eupl03g01195 | 1373 | FunFam | Eukaryotic translation initiation factor 5B | 775 | 1003 | - | - | |
Eupl03g01195 | 1373 | Pfam | Translation-initiation factor 2 | 1108 | 1222 | IPR023115 | - | |
Eupl03g01195 | 1373 | CDD | IF2_eIF5B | 784 | 994 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 741 | 763 | - | - | |
Eupl03g01195 | 1373 | Pfam | Elongation factor Tu domain 2 | 1020 | 1095 | IPR004161 | GO:0005525 | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 114 | 128 | - | - | |
Eupl03g01195 | 1373 | CDD | IF2_aeIF5B_IV | 1244 | 1339 | - | - | |
Eupl03g01195 | 1373 | Coils | Coil | 474 | 540 | - | - | |
Eupl03g01195 | 1373 | Pfam | Elongation factor Tu GTP binding domain | 785 | 993 | IPR000795 | GO:0003924|GO:0005525 | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 369 | 384 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 651 | 667 | - | - | |
Eupl03g01195 | 1373 | Coils | Coil | 1218 | 1238 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 416 | 437 | - | - | |
Eupl03g01195 | 1373 | Gene3D | - | 1125 | 1229 | IPR036925 | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 739 | 763 | - | - | |
Eupl03g01195 | 1373 | Gene3D | Translation factors | 1004 | 1124 | - | - | |
Eupl03g01195 | 1373 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 781 | 997 | IPR000795 | GO:0003924|GO:0005525 | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 445 | 557 | - | - | |
Eupl03g01195 | 1373 | SUPERFAMILY | Translation proteins | 1240 | 1372 | IPR009000 | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 327 | 342 | - | - | |
Eupl03g01195 | 1373 | Coils | Coil | 433 | 463 | - | - | |
Eupl03g01195 | 1373 | FunFam | Eukaryotic translation initiation factor 5B | 1123 | 1229 | - | - | |
Eupl03g01195 | 1373 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 1106 | 1235 | IPR036925 | - | |
Eupl03g01195 | 1373 | Gene3D | Translation factors | 1236 | 1373 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 1 | 557 | - | - | |
Eupl03g01195 | 1373 | MobiDBLite | consensus disorder prediction | 632 | 650 | - | - | |
Eupl03g01195 | 1373 | Gene3D | - | 775 | 1003 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl03g01195 | Eupl-Chr3 | 36550305 | 36567557 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl03g01195 | 207 | 1373 | Eukaryotic Initiation Factors Gene Family | AT1G76810 | 62.584 | 0.0 | 1178 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl03g01195 | K03243 | - | nnu:104606686 | 1622.83 |