Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01189 ATGAATCCTGCAGCGGTTCGTCACATCTCTAGGTGTGCCGTAAAACCACGGTTTATTTTGGAAGAATCACAGCAGCCATACTATTTGACGCCATGGGATCTTGCCATGTTCTCTGCACACTATATTCAAACGGGTCTTCTCTTCACCAAACCTCCACCTTCAGAAGATCAAAATTCGATGATCACCATCATTGATCAACTCAAAGAATCGCTATCTCTCACACTCGGCTACTACTTCCCTCTCGCTGGCCGCCTCGTAACCAAAAAAGACGATGACCCACCTTCCTACTCTGTCTTCTTAGACTGTAGCAACGCTCCAGGAGCCGAATTCATCTACGCCGTTGCAGACGTTACGATAGCTGATGTCCTATCCCCAATCGACGTACCCCCAATTGTCCAATCGTTCTTTGTCCTTGACGGAGCCGTTAATCATGACGGTCACACCGTGCCTTTGCTGGCCGTGCAGGTAACGGAGTTGGTGGACGGCATCTTCGTTGGCCTCTCTTTCAACCACGCCATAGGCGACGGCACGTCTTTCTGGAATTTCTTCAACGCGTGGTCTGAGATCTCTCGTAGAACTATAACAACAAAGGAAAATATCGAACGCATCTCACGGCCACCCATCACCAAACGCTGGTTTCTCGACCACCACGGTCCCATCATCAACCTTCCTTTCTCGCATCATGATGAGTTCATCGAGAGATACGCACCGCCACCAATGAGGGGGAGAATCTTCCATTTCTCCTCTGAATCCATTGCCCGACTCAAAGCCAAGGTCAACGCCGAGTGCAACACCAATAAGATTTCTTCCTTTCAGGCCTTGTCTGCGCTGGTGTGGAGATCGGTGACACGTGCGCGTCGTCCACCCATCGATCAGAAAACGATTTGTAGATTGGCCATCAATAGCAGATCGAGATTGAACCCGCCCTTGTCTAGCGATTACTTTGGCAACTCTATTCAGACGGTTAGTGGAGCCACCACAGCTGGCGAGTTACTAGACCACGGTCTTGGGTGGGCAGCGTGGCTGTTGCACCAGGGCATTGCCGGGCACACTGACAGCAAGATCCGCGGGTGGCTAGAAGCATGGGTGGAGGGTCCCTATATTTACCAGCTCGGACCTTTCTTTGATCAGTGGAGCGTGATGATGGGGTGCTCGCCGAGGTTCGAAATGTACAGCGACTTTGGGTGGGGAAAGGCGGTGGCAGTTCGGAGCGGTTACGCTAACAAATTCGACGGGAAGGTATCGTCGTACCCGGGTCGTGAAGGGGGAGGGAGCGTGGATTTGGAAGTGTGCCTTCTGCCGCAATCAATGAGTGAACTTGAATCGGATGAGGAGTTCATGGATGTAGTCTCTCCTGTCCCCACCCCAACTGCATTACTCTCTTGA 1386 0.5173 MNPAAVRHISRCAVKPRFILEESQQPYYLTPWDLAMFSAHYIQTGLLFTKPPPSEDQNSMITIIDQLKESLSLTLGYYFPLAGRLVTKKDDDPPSYSVFLDCSNAPGAEFIYAVADVTIADVLSPIDVPPIVQSFFVLDGAVNHDGHTVPLLAVQVTELVDGIFVGLSFNHAIGDGTSFWNFFNAWSEISRRTITTKENIERISRPPITKRWFLDHHGPIINLPFSHHDEFIERYAPPPMRGRIFHFSSESIARLKAKVNAECNTNKISSFQALSALVWRSVTRARRPPIDQKTICRLAINSRSRLNPPLSSDYFGNSIQTVSGATTAGELLDHGLGWAAWLLHQGIAGHTDSKIRGWLEAWVEGPYIYQLGPFFDQWSVMMGCSPRFEMYSDFGWGKAVAVRSGYANKFDGKVSSYPGREGGGSVDLEVCLLPQSMSELESDEEFMDVVSPVPTPTALLS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01189 461 Gene3D - 2 230 IPR023213 -
Eupl03g01189 461 Gene3D - 231 442 IPR023213 -
Eupl03g01189 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 447 - -
Eupl03g01189 461 Pfam Transferase family 9 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01189 Eupl-Chr3 36423302 36424687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01189 67 442 Monolignol Biosynthesis Gene Families AT5G48930 30.198 4.99e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01189 - - nnu:104606816 657.136