Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01188 ATGAATCCTGCAGCGGTTCGTCACATCTCTCGGTGTGCCGTAAAACCACAGTTTATTTTGGAAGAATCACAACAGCCGTACTATTTGACGCCATGGGATCTTGCCATGTTCTCTGCACACTACATTCAGAAGGGTCTTCTCTTCCCCAAACCTCCACCTTCAGAAGATCAAAACTCGACGATCACCATCATTGATCAACTCAAAGAATCGCTATCTCTCGCACTCGGCTACTTCTTCCCTCTCGCTGGTCGCCTCGTAACCAAAAAAGACGATGACCCACCTTCCTACTCTGTCTTCTTAGACTGTAGCAACGCTCCAGGAGCCGAATTCATCTACGCCGTCGCAGACGTTACGATAGCTGATGTCCTATCCCCAATCGACGTACCCCCAATTGTCCAATCGTTCTTTGTCCTTGACGGAGCCGTTAATCATGACGGCCACACCGTGCCTTTGCTGGCCGTGCAGGTAACGGAGTTGGTGGACGGCATCTTCGTTGGCCTCTCTTTCAACCACGCCATAGGCGACGGCACATCTTTCTGGAATTTCTTCAACGCGTGGTCTGAGATCTCTCGTAGAACGATAACAACAAAGGAAAATATCGAATGCATCTCACGCCCACCCATCACCAAACGCTGGTTTCTCGACCACCACGGTCCCATCATCAACCTTCCTTTCTCGCATCACGATGAGTTCATCGAGAGATACGCACCGCCACCAATGAGGGAGAGAATCTTCCATTTCTCATCTGAATCCATTGCCCGACTCAAAGCCAAGGCCAACGCCGATTGCAACACCAATAAGATTTCTTCCTTTCAGGCCTTGTCTGCGCTGGTGTGGAGATCGGTGACACGTGCGCGTCATCTACCCATCGATCAGAAAACGAGTTGTAGATTGGCCATCAATAACAGATCGAGATTGAACCCGCCCTTGTCTAGCGAATACTTTGGCAACTCTATTCAGACGGTGAGTGGAGTCACCACAGCTGGCGAGTTACTAGACCACGGTCTTGGGTGGGCAGCGTGGCTGTTGCACCAGGGTGTGGCCGGGCACACTGACAGCAAGATCCGCGGGTGGCTAGAGGCATGGGTGGAAGGTCCCTATATTTACCAGCTCGGACCGTTCTTTGATCAGTGGAGCGTGATGATGGGGAGCTCGCCGAGGTTCAAAATGTACAGCGACTTTGGGTGGGGAATGGCCGTGGCAGTTCGGAGCGGTTACGCTAACAAATTCGACGGGAAGGTATCGTCGTACCCGGGTCGTGAAGGGGGAGGGAGCGTGGATTTGGAAGTGTGCCTTCCGCCCCAATCAATGAGTGAACTTGAATCGGATGAGGAGTTCATGGATGTAGTCTCTCCAGTCCCCACCCCAACTGCATTACTCTCTCGAGTCTCTACCGACTCTCTAATATAG 1410 0.5191 MNPAAVRHISRCAVKPQFILEESQQPYYLTPWDLAMFSAHYIQKGLLFPKPPPSEDQNSTITIIDQLKESLSLALGYFFPLAGRLVTKKDDDPPSYSVFLDCSNAPGAEFIYAVADVTIADVLSPIDVPPIVQSFFVLDGAVNHDGHTVPLLAVQVTELVDGIFVGLSFNHAIGDGTSFWNFFNAWSEISRRTITTKENIECISRPPITKRWFLDHHGPIINLPFSHHDEFIERYAPPPMRERIFHFSSESIARLKAKANADCNTNKISSFQALSALVWRSVTRARHLPIDQKTSCRLAINNRSRLNPPLSSEYFGNSIQTVSGVTTAGELLDHGLGWAAWLLHQGVAGHTDSKIRGWLEAWVEGPYIYQLGPFFDQWSVMMGSSPRFKMYSDFGWGMAVAVRSGYANKFDGKVSSYPGREGGGSVDLEVCLPPQSMSELESDEEFMDVVSPVPTPTALLSRVSTDSLI* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01188 469 Pfam Transferase family 7 447 - -
Eupl03g01188 469 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 447 - -
Eupl03g01188 469 Gene3D - 231 442 IPR023213 -
Eupl03g01188 469 Gene3D - 2 230 IPR023213 -
Eupl03g01188 469 FunFam Tryptamine hydroxycinnamoyl transferase 226 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01188 Eupl-Chr3 36420250 36421659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01188 67 442 Monolignol Biosynthesis Gene Families AT5G48930 31.172 1.66e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01188 - - nnu:104606816 667.537