Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01187 ATGGCCTCTCCTTCGGCGGTTCGTCAAATCTCGAAATGCACCATAAGACCGCAGCGTATGCTAGAAGAAGCCCAGCAGCCTTGCAATTTGACGGCATGGGATTTATCCATGCTCACCGGAACATACCTTCAAATGGGTCTCCTCTTCCCTAAACCACCACCTTCCCATTCAATTAGCCTCCTCCTCGACATACTTAAGGATTCTCTCTCGTGCACTCTCGTTCACTTCTTCCCCCTTGCCGGCCGCCTCGCAACCAAAAAGGACGACCACCCACCTTCCTACATTATCTTCATAGACTGCACTGATGCTCCCGGAGCCGAATTCATACATGCTGCTGCAGACGTAACGATAGCCGAAATACTCACCCCGATCCATGTGCCAACTACTGTAAATGAGATGTTCCAGCTCAACGGGGCTGTCAACCATGACGGCCACACCATGCCGTTGCTCTCGGTGCAGGTGACTGAGCTGGTGGACGGCATCTTCGTCGGGTTATCTTTCAACCACGTTGTTGGCGATGGAAGCTCTTTCTGGCACTTCATGAATTCATGGTCCGAGATTTGTAGATCTAGAGGAGACCCGGAAAGTATGTCACGCCCACCCATCATCAAACGTTGGTTTCCCGACGGCCATGGTCCAAACATCAACCTTCCTTTCTCCCACTCAGACGAGTTCATAGACAGGTTAACCCCGCCACTGTTCAGAAAGAGAATCTTCCATTTCTCATCTCAATCCATCGCGAAACTGAAAGCGAAGGCCAACCATGAGTGCAACACCGACAAGATCTCCTCCTTCCAGTCTCTCTGTGCGCTCTTGTGGAGGTCGATGATTCGGGCACGTCATCTACCTGGTGATCAGACAACCGGATGCCTAATGACGATCGATTATCGAACGAGATTGCATCCTCCCTTGTCTCGGGACTACCTTGGCAATTGTGTTCATGCGGTTTACGCGTCCGCGACTGCGGGCGAGCTGGTCGACCGTGATCTTGGTTGTGCTGCGTGGCTGTTGCATCAAGGTGTGGTCAGCCACGATGACGGTGTAGTGCGCAAGAACTTTGAGGCATGGGTTAAGGCTCCTAGGGTTCACAATATTGGCCGGTTCCTCGCTGAAAGTTCGATTTTGATTGCGGGCTCGCCCAGGTTCGATGCATACGGGATCAATTTCGGGTGGGGAAAGCCAGTCGCGGTTCGTAGCGCGTTTTCCAACAGGTTCGAGGGAATGGTTACATCATTCCCGGGTCGCGAAGGGGGAGGTAGTGTGGATATGGAGGTGTGCCTGTTGCCGGAGACAATGAGTGCTCTCGAGTCAGATGAGGAGTTCATGGGTTTTGTTGTCGATCTCTGA 1347 0.5249 MASPSAVRQISKCTIRPQRMLEEAQQPCNLTAWDLSMLTGTYLQMGLLFPKPPPSHSISLLLDILKDSLSCTLVHFFPLAGRLATKKDDHPPSYIIFIDCTDAPGAEFIHAAADVTIAEILTPIHVPTTVNEMFQLNGAVNHDGHTMPLLSVQVTELVDGIFVGLSFNHVVGDGSSFWHFMNSWSEICRSRGDPESMSRPPIIKRWFPDGHGPNINLPFSHSDEFIDRLTPPLFRKRIFHFSSQSIAKLKAKANHECNTDKISSFQSLCALLWRSMIRARHLPGDQTTGCLMTIDYRTRLHPPLSRDYLGNCVHAVYASATAGELVDRDLGCAAWLLHQGVVSHDDGVVRKNFEAWVKAPRVHNIGRFLAESSILIAGSPRFDAYGINFGWGKPVAVRSAFSNRFEGMVTSFPGREGGGSVDMEVCLLPETMSALESDEEFMGFVVDL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01187 448 Gene3D - 228 437 IPR023213 -
Eupl03g01187 448 Gene3D - 2 227 IPR023213 -
Eupl03g01187 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 442 - -
Eupl03g01187 448 Pfam Transferase family 7 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01187 Eupl-Chr3 36406843 36408674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01187 64 437 Monolignol Biosynthesis Gene Families AT5G48930 29.949 2.98e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01187 - - nnu:104606816 558.14