Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01185 ATGGCCTCTCCTTCGGCGGTTCGTCAAATCTCGAGATGCACCATAAGACCGCAGCGTATGCCAGAAGAAGCCCAGCAGCCTTGCAATTTGACGGCATGGGATTTATCCATGCTCACCGGAACATACCTTCAAATGGGTCTCCTCTTCCCCAAACCACCACCTTCCCATACAATTAGCCTCCTCCTCGACACACTTAAGGATTCTCTCTCGTGCACTCTCGTTCACTTCTTCCCCCTTGCCGGCCGCCTCGTAACCAAAAAGGACGACCACCCACCTTCCTACGTTATCTTCATAGACTGCACTGATGCTCCCGGAGCCGAATTCATACATGCTGCTGCAGACGTAACGATAGCCGACATACTCACCCCGATCCATGTGCCAACCATTGTAAATGAGATGTTCCAGCTCAACGGAGCCGTCAACCATGACGGCCACACCATGCCGTTGCTCTCGGTGCAAGTGACTGAGCTGGTGGACGGCATCTTCGTCGGGTTATCTTTCAACCACGTTGTTGGGGATGGAAGCTCTTTCTGGCACTTCTTGAATTCATGGTCCGAGATTTGTAGATCTAGAGGAGACCCGGAAAGTATCTCACGCCCACCCATCATCAAACGTTGGTTTCCCGACGGCCATGGTCCAAACATCAACCTTCCTTTCTCCCACTCAGACGAGTTCATAGACAGGTTTACCCCGCCACTGTTCAGAAAGAGAATCTTCCATTTCTCATCTCAATCCATCGCGAAACTGAAAGCGAAGGCCAACCAGGAGTGCAACACCGACAAGATCTCCTCCTTCCAGTCTCTCTGTGCGCTCTTGTGGAGGTCGATGATTCGGGCACGTCATCTACCTGGTGATCAGACAACCAGATGCCTAATGACGATCGACTATCGAACTAGATTGCATCCTCCCTTGTCTCGGGACTACCTTGGCAATTGTGTTCATGCGGTTTACGCGTCCGCGACTGCGGGCGAGCTGGTCGACCGTGATCTTGGTTGTGCTGCGTGGCTGTTGCATCAAGGTGTGGTCGGCCACGACGACGGTGTAGTGCGCAAGAACTTTGAGGCATGGGTTAAGGCTCCTAGGGTTCACAATATTGGCCGGTTCATCACTGAAAGTTCGATTTTGATTGCGGGCTCGCCCAGGTTCGATGCATACGGGATCGATTTCGGGTGGGGAAAGCCAATCGCGGTTCGTAGCGCGTTTTCCAACAGGTTCGACGGAAAAGTTGCATCATACCCGGGTCGCGAAGGGGAGGTAGTGTGGATATGGAAGTGTGCCTGTTGCCGGAGACGATGA 1296 0.5293 MASPSAVRQISRCTIRPQRMPEEAQQPCNLTAWDLSMLTGTYLQMGLLFPKPPPSHTISLLLDTLKDSLSCTLVHFFPLAGRLVTKKDDHPPSYVIFIDCTDAPGAEFIHAAADVTIADILTPIHVPTIVNEMFQLNGAVNHDGHTMPLLSVQVTELVDGIFVGLSFNHVVGDGSSFWHFLNSWSEICRSRGDPESISRPPIIKRWFPDGHGPNINLPFSHSDEFIDRFTPPLFRKRIFHFSSQSIAKLKAKANQECNTDKISSFQSLCALLWRSMIRARHLPGDQTTRCLMTIDYRTRLHPPLSRDYLGNCVHAVYASATAGELVDRDLGCAAWLLHQGVVGHDDGVVRKNFEAWVKAPRVHNIGRFITESSILIAGSPRFDAYGIDFGWGKPIAVRSAFSNRFDGKVASYPGREGEVVWIWKCACCRRR* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01185 431 Pfam Transferase family 8 421 - -
Eupl03g01185 431 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 418 - -
Eupl03g01185 431 Gene3D - 2 228 IPR023213 -
Eupl03g01185 431 Gene3D - 229 426 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01185 Eupl-Chr3 36391052 36393284 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01185 64 395 Monolignol Biosynthesis Gene Families AT5G48930 31.818 1.32e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01185 - - nnu:104606816 536.954