Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01182 ATGTGGGATCTCAACGACTCACCTGATCAGAGGAGGAAGGAAGAATCTGAAGGGTGTTCTTCCCAGAAGACCTCCGGTGACGGAGACAACGAGAAGGGAAAAAGGGTCGGATCTGTTTCGAATGAGAATTCGAGCTCTTCTGCTGTAGTTATCGAGAATGGATCGAATGACGAGGAAGGAGGAGGAGGGAGGAGGAAGAGAAGTAGTAAGATCTTCGGTTTCTCAGTGACTCACGACAACAACAGCTCATCCGAGAGTGAACCGGTGGTGACCCGGCAATTTTTTCCAGTGGACGGGTCGCAAACGGGGATGCAAACGGGCGGAGGTATGGCACGTCTCCCACGGGCGCACTGGGTAGGGGTGAAATTCTGCCAGTCGCAGCCACTCGAGGCTACGAAGGCCATGGACGTCTCGCAGCCGATGAAGAAGAGTCGGAGAGGTCCCAGGTCTAGAAGCTCTCAGTATCGTGGCGTCACCTTTTACCGAAGAACCGGCCGTTGGGAGTCCCATATATGGGATTGTGGAAAGCAAGTTTATTTGGGTGGATTCGACACTGCACATGCAGCTGCTCGTGCATACGATAGAGCGGCTATCAAGTTTAGGGGAGTGGAGGCAGATATAAATTTCAGTCTGGGTGATTATGAAGAAGACTTGAAACAGATGAGTAATCTAAGTAAGGAGGAATTTGTTCACGTACTTCGCCGCCAAAGTACCGGTTTTCCTAGAGGAAGCTCCAAATTTAGAGGTGTTACCTTGCACAAATGTGGAAGATGGGAGGCTCGTATGGGGCAGTTCTTGGGCAAAAAATATGTATATTTGGGCCTCTACGACACTGAAATTGAAGCAGCGAGGGCTTATGATAAAGCTGCAATCAAGCACAATGGAAAGGAGGCTGTCACCAATTTTGATCCTAGTATTTACGAAAACGATCTCAATTCCAATGGCCATAACGTCGCAAATCACAATCTTGATTTGAGCTTGGGGAATTCAGCTTCAACGTTCGATAATCTTGAAATGGGGAACGAAAACCGATCAAGTACTATTAATCGACAATTCTCGGCTTTGCCATTCGAACTTGATTGGAGGAATAAGAATTGGGGATTTAAGCCCAAGATGCCGGATGAACAAGAAGCAATGAGGTTGCTCAACCACACTCACATCCAATCCCGAATCTCGCAAAGAAATGGGCAATTGAAGAGAAGCGGAGACGGTACCCCAATGGTTCACATGCTACAACAGCACTCGACTCCTCCAATTTATCAATTTCAGTTTCCGAACAGCAGCGACGGAGGTCAAATTGGTGTAGGATTTGTAGAAAGAGGAAGAGGAGGTCTTTCTGTGCCAACAAACGAGCAACATCGGCAATCGAGATTGAGCTGGCCTTCTAGTTCACCCCAGATGTTCATGACCGCAGCAGCATCATCAGGATTCCCATCGCAGATTACAAAACCACCAAGTTTGGTACAGAAGAACGGGTTCCACAGTTCCACTATCTCTTGA 1500 0.4793 MWDLNDSPDQRRKEESEGCSSQKTSGDGDNEKGKRVGSVSNENSSSSAVVIENGSNDEEGGGGRRKRSSKIFGFSVTHDNNSSSESEPVVTRQFFPVDGSQTGMQTGGGMARLPRAHWVGVKFCQSQPLEATKAMDVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSLGDYEEDLKQMSNLSKEEFVHVLRRQSTGFPRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLYDTEIEAARAYDKAAIKHNGKEAVTNFDPSIYENDLNSNGHNVANHNLDLSLGNSASTFDNLEMGNENRSSTINRQFSALPFELDWRNKNWGFKPKMPDEQEAMRLLNHTHIQSRISQRNGQLKRSGDGTPMVHMLQQHSTPPIYQFQFPNSSDGGQIGVGFVERGRGGLSVPTNEQHRQSRLSWPSSSPQMFMTAAASSGFPSQITKPPSLVQKNGFHSSTIS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01182 499 ProSiteProfiles AP2/ERF domain profile. 246 303 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 CDD AP2 154 209 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 Pfam AP2 domain 245 292 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 Pfam AP2 domain 154 202 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 MobiDBLite consensus disorder prediction 37 53 - -
Eupl03g01182 499 MobiDBLite consensus disorder prediction 1 20 - -
Eupl03g01182 499 FunFam AP2-like ethylene-responsive transcription factor 153 212 - -
Eupl03g01182 499 SMART rav1_2 246 309 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 SMART rav1_2 154 216 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 FunFam AP2-like ethylene-responsive transcription factor 245 305 - -
Eupl03g01182 499 SUPERFAMILY DNA-binding domain 153 210 IPR016177 GO:0003677
Eupl03g01182 499 SUPERFAMILY DNA-binding domain 245 305 IPR016177 GO:0003677
Eupl03g01182 499 MobiDBLite consensus disorder prediction 133 155 - -
Eupl03g01182 499 Gene3D AP2/ERF domain 153 211 IPR036955 GO:0003700|GO:0006355
Eupl03g01182 499 Gene3D AP2/ERF domain 245 304 IPR036955 GO:0003700|GO:0006355
Eupl03g01182 499 MobiDBLite consensus disorder prediction 476 499 - -
Eupl03g01182 499 MobiDBLite consensus disorder prediction 1 68 - -
Eupl03g01182 499 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 80 338 - -
Eupl03g01182 499 PRINTS Ethylene responsive element binding protein signature 247 258 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 PRINTS Ethylene responsive element binding protein signature 285 305 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 CDD AP2 245 305 IPR001471 GO:0003700|GO:0006355
Eupl03g01182 499 ProSiteProfiles AP2/ERF domain profile. 154 210 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01182 Eupl-Chr3 36358115 36361312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01182 1 333 AP2-EREBP Transcription Factor Family AT4G36920 66.286 6.98e-126 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Eupl03g01182 AP2 8.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01182 K09284 - vvi:100268051 623.239