Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01180 ATGAAGGTGCATCAGCTCACACGTGGGTCGTTCTGGGAGCACGAACCCTCACTCACACTGGGCTGCAAGCGTCTTCGTCCTCTTGCACCCAAGCTATCTAACTGTGAAACTATCGCTGCTCTCGATCTCAAGAGCTTTATCAAGGCTGATAGTGGCCCAAGGAAGGTTGGTTGCATGGAAGACAAGCGAGACTCAGCTCAGGTGGAAGCACACTCTGGTGGCACACGGTGGAACCCTACACAAGAACAAATTGGTATCCTAGAGATGCTCTATAGGAGTGGAATGCGTACTCCAAACGCACAACAAATCGAACAAATCACCGTTCAGCTCAGCAAGTACGGGAAGATCGAAGGGAAGAACGTTTTCTATTGGTTCCAAAACCATAAAGCACGCGAGAGGCAGAAGCAGAAGCGCAATAGTCTCGGTCTCACCCATTCACCAAGGACTCCCACTACCACTACTATAATCCCGGATACTAGTGGAGAAACAGAAAGGGAGGAAGATAGCAACTACAAGAGAAAACAGCGGAGTTGGATGATCGAGTGCATCGAAGAGGATAGCAGGTTGTGTGGAGAGGAGGAAGATAAAACACTGGAGCTCTTCCCTTTACACCCAGAAGGCAGATGA 627 0.4944 MKVHQLTRGSFWEHEPSLTLGCKRLRPLAPKLSNCETIAALDLKSFIKADSGPRKVGCMEDKRDSAQVEAHSGGTRWNPTQEQIGILEMLYRSGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLTHSPRTPTTTTIIPDTSGETEREEDSNYKRKQRSWMIECIEEDSRLCGEEEDKTLELFPLHPEGR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01180 208 ProSiteProfiles 'Homeobox' domain profile. 70 135 IPR001356 GO:0003677
Eupl03g01180 208 MobiDBLite consensus disorder prediction 140 159 - -
Eupl03g01180 208 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 208 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Eupl03g01180 208 MobiDBLite consensus disorder prediction 160 174 - -
Eupl03g01180 208 CDD homeodomain 75 136 IPR001356 GO:0003677
Eupl03g01180 208 FunFam WUSCHEL-related homeobox 4 74 141 - -
Eupl03g01180 208 Pfam Homeodomain 75 134 IPR001356 GO:0003677
Eupl03g01180 208 MobiDBLite consensus disorder prediction 133 174 - -
Eupl03g01180 208 SUPERFAMILY Homeodomain-like 72 140 IPR009057 -
Eupl03g01180 208 Gene3D - 74 141 - -
Eupl03g01180 208 SMART HOX_1 72 139 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01180 Eupl-Chr3 36316823 36318503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01180 1 160 Wox Gene Family AT1G46480 61.017 2.87e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl03g01180 Homeodomain 7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01180 - - vvi:100250666 317.005