Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01170 ATGTTTCCTCTTCTCCTCTCCGTCGCATTTCTTTTAGCTTCTGCTTCTGCTTCTGCTGCTGTTACACATCCTCCACCGTCGACGTCGCCTCCACCGAACTTGTTACTACCGTCTGATGCTCTCGCTATTCTCGCTTTCAAATCAAAGGCTGATTTGGATAACAAGCTCCGTTTCTCGCTGCACAATCGCTTCGATCACTGCCATTGGGAAGGTGTGAAATGCGCCCAAGGCAAGGTTGTGCGAATCGTCCTCCAAGGCTTCGCTCTTCGAGGCGTTTTCGACCCTAACACACTCAGTCGTTTGGACCAGCTTAGAGTCCTCAGTTTACATAACAATTCGCTCACCGGACCCATTCCCGATCTCTCCGGACTCGTTAACCTCAAAACGCTCTTTCTCGACTACAACTCCTTCACCGGTTACTTCCCACCTTCAATTCCATCTCTTCATCGTCTGCGGATCCTAGATCTCTCTCACAACCACCTCATCGGTCCAATCCCAGATGAGTTAACCGGTCTAGACCGGATTTTCTATCTCAGTCTCGAATTGAACAGGTTCAATGGCACTATTCCTCCACTCAACCAGTCTTCTCTCCAAATCTTCAATGTCTCCGGTAACAACCTCACCGGTGCCGTGCCGGTCACGCTCGCTCTCTTACGCTTCGGCATATCATCGTTTTCACGAAATCCTGGGCTCTGTGGCGAGATCATACACAGAGAGTGCGGTTCGCAGATACCCTTTTTTGTGCCTTCGGAGGCGGCGACGCCACCTGTGGGGCTTGGGCAGAACGAACAGTTACAAGGGCTCGTTCTGTCTCCACCATCTCCTAGAAAGCACAAGAAAACTACTGTAATTTTAGGGTTCTCAGTTGTGGTTTTGCTTCTGATTGGGTCTCTTCTGTGTGTTTTGTTGGCGATGAAGAAGCCGAGAAAGAAAAGGGTCTCAATGCCACCAACAATAGATTCTGATCCTGCTGCTGCTACTGCTATTGTAGTGCGTGTAGAAGAAAAGACCGAGTTGGACGCGAAGGCGAAGAAGGCACAAGGGGTTCAAAAGTGCAGGAGTGGGGGCTTGATATTCTGTGCAGGGGAGGCGCAGGTTTATACTCTGGAGCAGCTGATGGGTGCTTCGGCTGAGATGCTTGGGAGGGGCTCGATCGGGACTACATATAAAGCCGTGTTGGATAATCATCTGGTCCTCACCGTCAAACGTCTCGACACCAGTAAAACTGCGATCACGAGTAAAGAGATGTTCGAGCGGCACATGGAATCGGTCGGCAGTCTTCGCCACCCGAATCTGGTTCGGCTCAGAGCTTATTTCCAGGCCAAGGAAGAGAGGCTCATCATCTACGAGTATCAATCCAACGGCAGTCTCTTCTCCCTAATACATGGTTCGAGGTCAACCAGAGCGAAGCCTCTACACTGGACGTCGTGCTTGAAGATCGCAGAGGACATGGCGCAGGGCCTTGCGTACATCCACCAGACATCAAGGCTAGTTCATGGCAATCTCAAGTCTTCCAATGTCCTCCTCGGTGCTGACTTCGAGGCCTGTCTCACCGACTACTGCCTTGCAGTACTTGCCGACTCCTCCAATGAGGACACAGACTCTGCCGAGTACAGGGCACCGGAGACCCACAAATCCAGTCACCAAGCCACCTCCAAATCCGATGTCTATGCTTTTGGCGTTCTCTTACTGGAGCTTCTCACTGGCAAACCTCCATCACAACATCCCTTCCTCATGCCCGTGGATCTTCCAAATTGGGTCCGGTCCACTAGGGAAGAGGAAGGTGGTGAAGACAACCGGCTGGTGATGCTACTTGGGGTAGCTACAGCATGTGGCCAGACATCACCAGAGCAGAGACCTACGATGTTGCAAGTCTTGAAGATGATTCAGGAGATCAAGGAGACTGTGATGATGGAGGATAACGAGTTCAATTCATCCGCCGGCTATTGCTAG 1953 0.5131 MFPLLLSVAFLLASASASAAVTHPPPSTSPPPNLLLPSDALAILAFKSKADLDNKLRFSLHNRFDHCHWEGVKCAQGKVVRIVLQGFALRGVFDPNTLSRLDQLRVLSLHNNSLTGPIPDLSGLVNLKTLFLDYNSFTGYFPPSIPSLHRLRILDLSHNHLIGPIPDELTGLDRIFYLSLELNRFNGTIPPLNQSSLQIFNVSGNNLTGAVPVTLALLRFGISSFSRNPGLCGEIIHRECGSQIPFFVPSEAATPPVGLGQNEQLQGLVLSPPSPRKHKKTTVILGFSVVVLLLIGSLLCVLLAMKKPRKKRVSMPPTIDSDPAAATAIVVRVEEKTELDAKAKKAQGVQKCRSGGLIFCAGEAQVYTLEQLMGASAEMLGRGSIGTTYKAVLDNHLVLTVKRLDTSKTAITSKEMFERHMESVGSLRHPNLVRLRAYFQAKEERLIIYEYQSNGSLFSLIHGSRSTRAKPLHWTSCLKIAEDMAQGLAYIHQTSRLVHGNLKSSNVLLGADFEACLTDYCLAVLADSSNEDTDSAEYRAPETHKSSHQATSKSDVYAFGVLLLELLTGKPPSQHPFLMPVDLPNWVRSTREEEGGEDNRLVMLLGVATACGQTSPEQRPTMLQVLKMIQEIKETVMMEDNEFNSSAGYC* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01170 650 FunFam Nuclear pore complex protein NUP107 37 191 - -
Eupl03g01170 650 Pfam Protein kinase domain 378 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01170 650 SUPERFAMILY L domain-like 46 232 - -
Eupl03g01170 650 ProSiteProfiles Leucine-rich repeat profile. 103 125 IPR001611 GO:0005515
Eupl03g01170 650 Gene3D Phosphorylase Kinase; domain 1 360 451 - -
Eupl03g01170 650 Gene3D Transferase(Phosphotransferase) domain 1 453 647 - -
Eupl03g01170 650 ProSiteProfiles Protein kinase domain profile. 374 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01170 650 Gene3D Ribonuclease Inhibitor 194 242 IPR032675 -
Eupl03g01170 650 Gene3D Ribonuclease Inhibitor 37 193 IPR032675 -
Eupl03g01170 650 Pfam Leucine rich repeat 126 184 IPR001611 GO:0005515
Eupl03g01170 650 SUPERFAMILY Protein kinase-like (PK-like) 378 635 IPR011009 -
Eupl03g01170 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 634 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01170 Eupl-Chr3 36168753 36173640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01170 39 643 Receptor kinase-like Gene Family AT5G43020 56.070 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl03g01170 Pkinase 5.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01170 - - nnu:104606954 856.67