Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01165 ATGGCGGTGGAGCTTATGATGGGTTACAGCAGCGATAGTTTTGCCGCAAAGATGGAGGAGAATGCAGTCGAAGAAGCGGCCTCTGCAGGGCTTGAGAGCGTTGAGAAGCTCATAAGGATACTCTCTCATCAGCAATACCAGACCTCAACGAACCCAAAAGCAGCCATTGATATGGAGATGGATTGCAGGGCTGTCGCAGATGTGGCCGTGACCAAGTTCAAGAAGGTGATTTCGTTACTGGGTCGGACGAGAACGGGCCACGCTCGCTTCAGAAGGGCTCCTTTGGCTTCTCACCAACAACAGCCCCGAGAGATCGACGCGCCCTTTTCTGTGACACATTTTCAGAAAGAGGAGAAGCAGTCTTCTGGGTCTAGGCTTTATTGTCCGACGCCGATCCAACGGATCCCACCTCTCCCTCCTCCTCATCATCATCAGCAAAACCCTCCCCTCACGATGCCGAATAAAGCCGTCAGCGAGAGAAAAGAGTCTTCGAGTACTACGTTTACTTTCACGTCTTCTCCTGCAATTTCTGCAGCGAATTCGTTCATATCGTCGTTGACTGGTGATACTGATAGCAAGCAACCTTCATCCTCGTCGGCCTTTCAGATTACGCATCCAGTTTCATCGGCTGGACGGCCTCCTTTGTCTTCGTCTTCCTTGAAGAGAAAGTGTGGCTCTTCCGACGACGCGGCTGCCAAATGCGGAGGAGGAGATGCTGGGCGCTGCCATTGTTCGAAGCGAAGGAAATCAAGAGTTAAGAGGGTGGTAAGAGTTCCAGCGATTAGTTTGAAGATGTCTGATATCCCACCAGACGATTTTTCGTGGAGGAAATACGGGCAGAAACCCATCAAAGGATCCCCGCATCCAAGGGGGTACTACAAGTGCAGTAGCATGAAGGGTTGCCCAGCACGTAAACATGTGGAAAGAGCTTTAGAGGATCCAACGATGCTGATCGTCACATACGAAGGCGAGCACAACCACTCCCACTCAGTCACGGAGGCAACAGGTTTCATCCTCGAATCTTCTTAG 1029 0.5131 MAVELMMGYSSDSFAAKMEENAVEEAASAGLESVEKLIRILSHQQYQTSTNPKAAIDMEMDCRAVADVAVTKFKKVISLLGRTRTGHARFRRAPLASHQQQPREIDAPFSVTHFQKEEKQSSGSRLYCPTPIQRIPPLPPPHHHQQNPPLTMPNKAVSERKESSSTTFTFTSSPAISAANSFISSLTGDTDSKQPSSSSAFQITHPVSSAGRPPLSSSSLKRKCGSSDDAAAKCGGGDAGRCHCSKRRKSRVKRVVRVPAISLKMSDIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSMKGCPARKHVERALEDPTMLIVTYEGEHNHSHSVTEATGFILESS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01165 342 MobiDBLite consensus disorder prediction 132 147 - -
Eupl03g01165 342 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01165 342 MobiDBLite consensus disorder prediction 186 240 - -
Eupl03g01165 342 SUPERFAMILY WRKY DNA-binding domain 267 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl03g01165 342 Gene3D WRKY domain 253 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl03g01165 342 FunFam WRKY transcription factor 65 253 330 - -
Eupl03g01165 342 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 330 IPR044810 GO:0003700
Eupl03g01165 342 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01165 342 MobiDBLite consensus disorder prediction 116 169 - -
Eupl03g01165 342 Pfam Plant zinc cluster domain 221 267 IPR018872 -
Eupl03g01165 342 MobiDBLite consensus disorder prediction 148 169 - -
Eupl03g01165 342 Pfam WRKY DNA -binding domain 271 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl03g01165 342 MobiDBLite consensus disorder prediction 186 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01165 Eupl-Chr3 36100892 36108643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01165 17 333 WRKY Transcription Factor Family AT2G24570 44.753 3.66e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl03g01165 WRKY 4.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01165 - - nnu:104601709 452.595