Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01153 ATGGCTCCACAACAACAACAACAAACAAACTCTGTATTCCTTCTCGATGCTCTCTACTGTGAAGAAGAGTGTTGGGAGGAAGAAGAAGAACTAGATGAAGAAGTGACTGAGAACAGTAACAATGGAACAAACCCATACCCATCTCTTCTTTTATTGGAACAGGATCTGTTTTGGGAAGACGAGGAGCTTCTCTCTCTCTTCTCCAAGGAAAAACAGACCCACCACCTACTCAACAATCTCGATTCAAATCTGTCTCTTGCGACGGTTCGTCGAGAGGTCGTGGAATGGATGTTGAGGGTTAATGCTCACTATGCCTTCTCTGCTCTTACTGCAGTTCTTGCTGTTAATTACCTTGATAGGTTCCTCTCAAGCTTTCGTTACCAGAGGGACAAGCCATGGATGACCCAACTTGCTGCCGTTGCTTGTCTTTCTTTAGCTGCTAAGGTGGAGGAGACCCAAGTTCCTCTTCTTTTAGACCTGCAAGTGGAGGAGACGAAGTATGTTTTCGAGGCGAAAACGATTCAGAGAATGGAGCTTCTGGTGCTCTCTACGCTTCATTGGAAGATGAATCCTGTTACCCCGCTTTCGTTTGTGGATCACATTATAAGGAGGCTTGGATTGAAGAATCATCTCCATTGGGAGTTTATGAGGAGGTGCGAGCGTCTCCTTCTCTCTGTCATGGCAGATTCGAGGTTTGTTTGTTATCTTCCTTCTGTACTGGCTACTGCAACAATGCTGCACGTTATCAACCAGGTCGAGACCTGTAATCCGATCGAATACCAAAACCAACTTATGGGTGTCCTCAAAATCAGCAAGGACAAAGTAGACGACTGTTATCAGTTCATCCTGGAATTAGCTTCGGGCAACCATGGCGACAACCAGAACCACAATCACAAACGCAAGTATCATCAGTCATTACCCGGAAGCCCAAGCGGCGTAATCGATGCGTCATTCAGCTGCGACAGCTCGAACGACTCGTGGGCTGTGGCATCATCGGTTTCATCGTCGCCGGAACCTCTGTTCAAGAAGAGCAGAATCCAGGACCAGCAGATGCGGTTGCCGTCATTAAACCGTGTGGCGGTGGATGTCCTGAGCAGCCCTCGTTAA 1107 0.4743 MAPQQQQQTNSVFLLDALYCEEECWEEEEELDEEVTENSNNGTNPYPSLLLLEQDLFWEDEELLSLFSKEKQTHHLLNNLDSNLSLATVRREVVEWMLRVNAHYAFSALTAVLAVNYLDRFLSSFRYQRDKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETKYVFEAKTIQRMELLVLSTLHWKMNPVTPLSFVDHIIRRLGLKNHLHWEFMRRCERLLLSVMADSRFVCYLPSVLATATMLHVINQVETCNPIEYQNQLMGVLKISKDKVDDCYQFILELASGNHGDNQNHNHKRKYHQSLPGSPSGVIDASFSCDSSNDSWAVASSVSSSPEPLFKKSRIQDQQMRLPSLNRVAVDVLSSPR* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01153 368 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Eupl03g01153 368 SMART Cyclin_C_2 192 322 IPR004367 -
Eupl03g01153 368 CDD CYCLIN_AtCycD-like_rpt2 192 280 - -
Eupl03g01153 368 Gene3D - 73 190 - -
Eupl03g01153 368 SUPERFAMILY Cyclin-like 57 190 IPR036915 -
Eupl03g01153 368 PANTHER CYCLINS 63 295 IPR039361 -
Eupl03g01153 368 FunFam CYCLIN D32 191 280 - -
Eupl03g01153 368 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
Eupl03g01153 368 SMART cyclin_7 95 183 IPR013763 -
Eupl03g01153 368 Gene3D - 72 280 - -
Eupl03g01153 368 Pfam Cyclin, C-terminal domain 192 305 IPR004367 -
Eupl03g01153 368 FunFam D3-type cyclin 83 190 - -
Eupl03g01153 368 Pfam Cyclin, N-terminal domain 69 190 IPR006671 -
Eupl03g01153 368 SUPERFAMILY Cyclin-like 193 306 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01153 Eupl-Chr3 35881647 35883771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01153 5 291 Core Cell Cycle Gene Families AT4G34160 63.066 1.06e-123 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01153 K14505 - nnu:104588130 491.886