Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01117 ATGCACTTCTGTGACATAGTAACTACGGATGGTTATTTATACTTCAAAGTCTATATTGATCGCAATGTTGAACATGTAATTGATCTCTTAAAAGAAACGAATCAAATGCAGAGAGCTCCTTACTACAAAGATTTTGTTGTTAAATCCCAGGATTCAGGCGACATGACTATTAGTGTAGGGCCTTTAGTTTCTTTGGATGAGCAAGGCAATGCTATTCTGAATGGGTTGGAGATCATGGAGATTAGGAACGACACTGTGGGTCCGATTTCTTTGCAAAACAAATGCAACAAAAACAATGTTTTTGTTCTCGTTGGCTCAGTTCTCGGGGGATTTGCTTTTGTCTGCATGTTGATAGCTGCGTTCCTTTTGGTGTTAAAATGCAGGAAACCAAAGCCGGTAGATACTGGAACATGGTTGCCACTTCCTGTACATGGGGGGAGCTCATATAGTAGGTTTTCTGAAGGGAACACCAATGCATCCCCTGTCCCCGATATAAATCTAGGCTTAAAGATTCCTTTTGCCGATATACAGCTTGCAACTAACAATTTTGACAATGCGTTGCTCATAGGAGGTGGTGGATTTGGGAAAGTCTATAAAGGGGTGCTTAGGAACAGCATGGAAGTTGCCGTGAAGCGTTGTGAACTGGGGTCAGACCAGGGCCTTCCAGAATTTAGGGCGGAGATCATGATGTTTTCCAAAATTCGTCATCGCCATGTGGTTTCCTTGATTGGGTATTGTGATGAAAGGTCGGAGATGATACTGGTCTATGAATTCATGGAAAAGGGGACATTGAGAAATCATCTTTACGGTTCGGATTCGCATCGTTTGTCTTGGAAGCAGAGGCTTCAGATATGCATTGATTCAGCAAGGGGCCTTCATTACCTCCATACCAGTTCACTCGGGGGAATCATTCATCGCGATGTTAAGTCGACAAACATCTTGCTTGATGAGAACTATGTCGCTAAAGTTTCTGATTTTGGTCTTTCAAGGTCGGGGCCTTCTCTCGATCAGACCCATGTAAGTACGAGTGTAAAAGGCAGCTTCGGGTACCTTGATCCAGAGTATTTTAGACGTCAAAAGTTAACAGATAAGTCAGATGTGTACTCCTTTGGAGTGGTGCTTCTTGAAGTACTTTGTGCGAGACCTGCCCTTGATACTTCGCTTCCAAGGGACCAGGTGAACTTAGCTGAATGGGGTATGCAGAGGAAGAAGAAGGGCTTAATCGAGCAGATTATTGATCCTTTGCTAGTGGGTAAAATTCATCCTGATTGTCTGAGGAAATTCGGGGAGATAGCAGAGAAATGTTTGAGTGAATATGGTGTAGACAGGCCGACTATGGGTGATGTGGTGTGGGACTTGGAATATGCACTCCAACTTCAAGAGAGTGCAGTGCACAGAGAAGCGCACGAGGACAGCACCAACTGTGCAGTGTCTGAGCTCCCGTTGCGCACTGTTCCACGTGTTCTTTCAGCCAGCATGCCAGTTGGGAAGGATGATATACCCCTAAACAGCTATGGAGGTTCCGACACAACAGCAAGCCAAGTGTTCTCTCAATTGATGATCAATGAAGGCAGATAG 1578 0.4449 MHFCDIVTTDGYLYFKVYIDRNVEHVIDLLKETNQMQRAPYYKDFVVKSQDSGDMTISVGPLVSLDEQGNAILNGLEIMEIRNDTVGPISLQNKCNKNNVFVLVGSVLGGFAFVCMLIAAFLLVLKCRKPKPVDTGTWLPLPVHGGSSYSRFSEGNTNASPVPDINLGLKIPFADIQLATNNFDNALLIGGGGFGKVYKGVLRNSMEVAVKRCELGSDQGLPEFRAEIMMFSKIRHRHVVSLIGYCDERSEMILVYEFMEKGTLRNHLYGSDSHRLSWKQRLQICIDSARGLHYLHTSSLGGIIHRDVKSTNILLDENYVAKVSDFGLSRSGPSLDQTHVSTSVKGSFGYLDPEYFRRQKLTDKSDVYSFGVVLLEVLCARPALDTSLPRDQVNLAEWGMQRKKKGLIEQIIDPLLVGKIHPDCLRKFGEIAEKCLSEYGVDRPTMGDVVWDLEYALQLQESAVHREAHEDSTNCAVSELPLRTVPRVLSASMPVGKDDIPLNSYGGSDTTASQVFSQLMINEGR* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01117 525 Gene3D Transferase(Phosphotransferase) domain 1 259 479 - -
Eupl03g01117 525 SUPERFAMILY Protein kinase-like (PK-like) 158 453 IPR011009 -
Eupl03g01117 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Eupl03g01117 525 CDD STKc_IRAK 189 454 - -
Eupl03g01117 525 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Eupl03g01117 525 FunFam receptor-like protein kinase FERONIA 148 258 - -
Eupl03g01117 525 FunFam Receptor-like protein kinase FERONIA 259 474 - -
Eupl03g01117 525 PANTHER OS07G0166700 PROTEIN 170 460 IPR045272 GO:0004714|GO:0006468
Eupl03g01117 525 Pfam Malectin-like domain 1 80 IPR024788 -
Eupl03g01117 525 Gene3D Phosphorylase Kinase; domain 1 151 258 - -
Eupl03g01117 525 SMART serkin_6 183 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01117 525 ProSiteProfiles Protein kinase domain profile. 183 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01117 525 Pfam Protein tyrosine and serine/threonine kinase 189 451 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01117 Eupl-Chr3 35428513 35430336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01117 1 525 Receptor kinase-like Gene Family AT3G46290 52.022 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl03g01117 PK_Tyr_Ser-Thr 6.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01117 - - nnu:104595987 624.394