Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01114 ATGGCTTCGAACGAGAGTTTCGATGGAGACCTTCTTTCAGGCGGGGGTTTCTCTCAGTTATTGGATTCCGGCGACGTCGTTGGTCTTGATATGGCGGAAACCTTAATCTACCCATCTTCTTTTCCCGTTGGAAACTCTCCTACCATGCTTTGTTTCGAGAAAGTCAGCGGCGGAGGCAAACGTGGGTTTGGAGAAATAGGGACGACAACCCAGAAATCTGGAATCACTGGTAGTGATTCATCTTCGGCTTCTTCCAGCAACAATAGCAGCAACAGCAGTGGCGTCTCCAAGTCGAAGGAAGACCAAACTGGAGAACCGAAGATACAACAGAAAAGAGGAAATGGGTCGGGACCCGGCTCGGGCCCAGACTCGGGAGCTACAACTGAGCGCCGGAAAACATGTAAAAATCAAAAAACAGAGAACCCAACTTCAATCCGACCTGTGAAGGTGAGGAAAGAGAAGATTGGAGAACGAATTACAGCGTTGCAGCAGCTTGTTTCTCCCTTCGGCAAGACAGACACGGCTTCCGTTCTTCACGAAGCGATGGGATATATCAGGTTTCTCCACGAGCAAGTTCAGGTTCTGAGTTCTCCGTATTTGCAACGGCTGCCATCATCCGCCTACCTGCCCCAGGATGGAGGAGGAGCAGAAGACGACGAAGGGAGATACGATCTGAGGAGCAGGGGTCTGTGTTTGGTCCCAGTTGCAAGCACTCTACACGTGGCAAACAGCAACGGCGCTGATTTCTGGTCACCTGCCATGGGGAGCAAATCCTTAAAGCACTAA 786 0.5089 MASNESFDGDLLSGGGFSQLLDSGDVVGLDMAETLIYPSSFPVGNSPTMLCFEKVSGGGKRGFGEIGTTTQKSGITGSDSSSASSSNNSSNSSGVSKSKEDQTGEPKIQQKRGNGSGPGSGPDSGATTERRKTCKNQKTENPTSIRPVKVRKEKIGERITALQQLVSPFGKTDTASVLHEAMGYIRFLHEQVQVLSSPYLQRLPSSAYLPQDGGGAEDDEGRYDLRSRGLCLVPVASTLHVANSNGADFWSPAMGSKSLKH* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01114 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 201 IPR036638 GO:0046983
Eupl03g01114 261 CDD bHLH_AtbHLH_like 145 196 IPR045239 -
Eupl03g01114 261 FunFam Transcription factor bHLH113 family 135 211 - -
Eupl03g01114 261 Gene3D - 149 204 IPR036638 GO:0046983
Eupl03g01114 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Eupl03g01114 261 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 46 241 - -
Eupl03g01114 261 MobiDBLite consensus disorder prediction 66 99 - -
Eupl03g01114 261 MobiDBLite consensus disorder prediction 61 148 - -
Eupl03g01114 261 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01114 Eupl-Chr3 35348801 35350644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01114 149 253 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 59.048 2.77e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01114 - - nnu:104607390 318.161