Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01107 ATGAGAGGGACTCGTGGCTGCCTGGCACCAGAATGGCTCAGCAACACTGGAATCTCTGACAAGACGGATGTGTACAGTTATGGTGTGGTTTTGCTTGAGATCATAAGGGGGAGTAAGAACTGCTTGATCGTCGACCAAAGGGATAATAATGAATCAAGATGGTCTTACTTTCCCATGTTGGCATTGGACATGTACAAGCAAGGTCGATTCTTGGAGCTTGCTGATCCGAGATTGGAGGGTAAGGTGAGGAGTGAACAAGTCGAGATTCTAGTGAAAATAGCTTTGTGTTGCTTGCAAGAGGAGCCACGGATAAGACCAAGCATGGCCAATGTGGTAAGGATGTTAGAAGGAAGATTGGCCTTGGGAGAGCCTCAAATCAACTCTCTGAAATTATTACGAATATATGGTCGCCGGTCCATCGATCATGGCATCACGGAGCTGAGTGACGATGATGTCTTAATCCATCAAAACAGCTCAACCATCACCACTTCTCCCTCAAGAGATATTGTACCTTTTCTTTCTTACCTCTCCTCCCAACAGATCTCTGGTCCTAGATAG 558 0.4606 MRGTRGCLAPEWLSNTGISDKTDVYSYGVVLLEIIRGSKNCLIVDQRDNNESRWSYFPMLALDMYKQGRFLELADPRLEGKVRSEQVEILVKIALCCLQEEPRIRPSMANVVRMLEGRLALGEPQINSLKLLRIYGRRSIDHGITELSDDDVLIHQNSSTITTSPSRDIVPFLSYLSSQQISGPR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01107 185 Pfam Protein kinase domain 2 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01107 185 SUPERFAMILY Protein kinase-like (PK-like) 2 128 IPR011009 -
Eupl03g01107 185 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
Eupl03g01107 185 PANTHER OS07G0415500 PROTEIN 1 125 - -
Eupl03g01107 185 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01107 Eupl-Chr3 35202583 35203140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01107 1 124 Receptor kinase-like Gene Family AT5G20050 42.857 3.36e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl03g01107 Pkinase 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01107 - - nnu:104608513 206.068