Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01104 ATGATGATCTTCCAGCGAGAAGAAGAAGAAGAAGAAGCAGCAGCAGTAACAGAAATATCGGTCAACAACGATCATACTGGTTCAAAAATCAACGAAAATGATGAGAGGGGAGTGGGTGATGTTAATTTGGGAGAGTGGTTGAATTTGAGCCTTGGTAGAAATGAACCGTTGATGGGTGGGGATTTTGACTCCCAATCGAAACCCACTTCCAACAAGGTCTTCTCTTGCAACTTCTGCATGAGGAAGTTCTTCAGTTCACAAGCATTAGGGGGTCATCAGAATGCTCACAAGAGGGAAAGAGGAGCAGCTAGAAGGTATCAGTCACAGAGGATGATGACTATGATGGGAGGTTTTCCCTTCAATCCTCCAATTATCCGATCACTTGGTGTCCGACCTCACTCACTTGTACACAAGCCAAGCAGAGAAGGGAATAGTATGGTAGCACGGTTCAATGATGTCAACTCTGGGTTTGGGATGTCTCAGATGCCCTTCACGCTTGAAGAAGCAATGGATATGATGTGGCCAGGAAGCTTTCATGTAGGCCCACAACTTCTCAAGCAACCATCAGAGCTACTTCAGCTTGACTTGAATCTCCGACTCTGA 603 0.4561 MMIFQREEEEEEAAAVTEISVNNDHTGSKINENDERGVGDVNLGEWLNLSLGRNEPLMGGDFDSQSKPTSNKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRMMTMMGGFPFNPPIIRSLGVRPHSLVHKPSREGNSMVARFNDVNSGFGMSQMPFTLEEAMDMMWPGSFHVGPQLLKQPSELLQLDLNLRL* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01104 200 SUPERFAMILY beta-beta-alpha zinc fingers 69 100 IPR036236 -
Eupl03g01104 200 PANTHER ZINC FINGER PROTEIN 4-LIKE 3 200 - -
Eupl03g01104 200 Gene3D Classic Zinc Finger 61 116 - -
Eupl03g01104 200 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Eupl03g01104 200 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01104 Eupl-Chr3 35130580 35131521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01104 69 178 C2H2 Transcription Factor Family AT1G66140 36.232 4.20e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01104 - - psom:113346733 235.728