Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01102 ATGGAGGCTGCTTCACCAACACAGGAAAACTGTCAAGCAGTAAGAAGTTTAAGCCCCAAACAGAACACATTCGAACAAGAACATGCACATGGCTCTGAAAATGTGCAAGGTCAACATGTGGAAACGAGGATTGTGGGACCCGATTTTGTTGAAGTCGGACTATTGGTCACTCCACTGAAGGATGCAGCAGAGAATCCTAGTAGGTCAGCACGCAAGGAAAATAGGGTTTCCTCAACTTCAGTAAAAAGAAAGTATATGTTGAGATCTTCTGTAGGTAGTGCCAGAGTTCTTCGGTCAAGGCTACGTGGTACTTGTAAACCTCCCGATCCAAGTAGTAATTCAGTAAATGTTAGTGCCAAAAGAGAGAAAAAAAGGAAAAACAGGAAAAAAATAAAGAGAACAATCAATGATGAATTTTCAAAAACTAGGAAACGTCTAAGATACATATTGACTCGGATGGGCTATGAGCGTAATTTGATCGATGCTTATTCTGGTGAAGGTTGGAAAGGACAAAGCATAGAAAAAATAAAGCCAGAGAAGGAGCTTCAACGTGCCACTTCTGAAATTTTACGTTGCAAACTGAGAATACGTGATTTATTTCAACATCTTGATTCTTTATGTGCTGAAGGAAGGCTTCAGGAGTCTTTTTTTGATTCCGAAGGACAAATCAACAGTGAGGATATCTTTTGTGCCAAATGTGGGTCCAAAGACTTGTCTGCTGATAATGATATTATACTCTGTGATGGTATTTGTGACCGCGGCTTTCATCAGATGTGTTTGGAACCCCCGTTATTAAAAGAAGAAATTCCTCCCGGAGATGAGGGTTGGTTGTGCCCTGGATGTGATTGCAAAGTAGATTGCATTGACTTACTTAATGACTCCCAAGGAACAGATCTTTCTATTGGTGATAACTGGGAGAAGGTTTTTCCTGAGGTAGCTGCTGGAGATAAGCCAGATGACAACTTCGGATTTCCATCAGATGATTCCGAGGATGATGACTATGACCCTGATGGTCCACAGGTGGATGAGAGGGTTCAGAAGGAAGGCTCAAGTTCTGAAGAATCTGATTTTACTTCTGCCTCTGATGACTCGGGGGCTTCATCCCATGACGAGCAGTACTTGGGACTTCCTTCTGATGATTCAGAGGATGATGATTATGATCCTAATGCTCCAGATCTCGATGAACAGTTAAAGAAAGAAACATCCAGTTCTGATTTTACATCTGACTCTGAGGACTCTAATGCTTTAAGTGATGGTAAGCCTTCAAGCAGAGATGAAGATCCTGTGTCCTCTTCAGCGGATGGTGCCAAGCCTCTCACTGGTTCAGGGGAAAGAGGATCTACAATGACAAGAAAGAAGAAACAGTCAGTAAACTCAGAAGTGCTATCAATCCTGGAGGCAGGTCCAAGCCAAAGAAATGCTTCACCTGTGTCAGGGAAAAGATCCCGTGAACGGCTGGACTACAAAAAACTGCATGATGAGGCGTACGGCAATGTTCCTTCTGATTCAAGTGATGATGAAGACTGGACTGACACAGATGCAACAAGGAAAAGGAAGAATGAAGGTGTTGGAAATGAATCTGTCATATCACCAAATGGAAATTCTGCAGCAATTAAGAGTGGAACAAGTACCAGGGATGCACATCGAAATTTAAAACATACTGAAAATACTCCACAGAGAAGAACTCGCCAGAAGCTGGACTTTGCAGGCGCAAATAGTTCAGCAGCTGAAACACATAAAGATAGTCCAGAGCCTGATAAAAAGGCTACTGCATCGCCATCTGGAACTCTTGGAAAAGCAAGAACTCAGAGACTCCTGGAATCATTGAGGGAAAATAAGTACCCAGCCCGAGACACAAAAAAGAATCTAGCTGAAGAACTAGGAATCACAGTCCGGCAGGTTAGCAAATGGTTTGAGAATGCTCGTAGGAGCTTGCGCCAAGCAAACATTAGAGCAAGTAGAGTGGGAATAGCTTCTCCAAACAAGGACACTATCCTGACCCGAACAAATGGAAAGGTTCTTGAACCTGAACCAAAAAATCTTGCTAATGATGGTGCTAGCAATGGAGTTGAGAGCAAAGAACTGGCTAAAGCAGGCACTGTTGAGATGCCTTGCTGCAGCATGGATGTGGAGAGAAGATGCATGACTGGAGAACCCAGTCCACAGAAATCAATGAGCCCCAAGTTAAGAAATAGGGGAAATGATATGATAGATCATCGAACATCAAACAAGGCTTTGGGTACTAAGGAGACAGATTCACCAGGAGCTCAAGCAGCTCGGAGAAATGGCCAAAACACAAATCAGGAAGTGACTCGATTGCAGGTACGAACTAGAAGTAGAAAAGCTGTTGCTTGA 2355 0.4306 MEAASPTQENCQAVRSLSPKQNTFEQEHAHGSENVQGQHVETRIVGPDFVEVGLLVTPLKDAAENPSRSARKENRVSSTSVKRKYMLRSSVGSARVLRSRLRGTCKPPDPSSNSVNVSAKREKKRKNRKKIKRTINDEFSKTRKRLRYILTRMGYERNLIDAYSGEGWKGQSIEKIKPEKELQRATSEILRCKLRIRDLFQHLDSLCAEGRLQESFFDSEGQINSEDIFCAKCGSKDLSADNDIILCDGICDRGFHQMCLEPPLLKEEIPPGDEGWLCPGCDCKVDCIDLLNDSQGTDLSIGDNWEKVFPEVAAGDKPDDNFGFPSDDSEDDDYDPDGPQVDERVQKEGSSSEESDFTSASDDSGASSHDEQYLGLPSDDSEDDDYDPNAPDLDEQLKKETSSSDFTSDSEDSNALSDGKPSSRDEDPVSSSADGAKPLTGSGERGSTMTRKKKQSVNSEVLSILEAGPSQRNASPVSGKRSRERLDYKKLHDEAYGNVPSDSSDDEDWTDTDATRKRKNEGVGNESVISPNGNSAAIKSGTSTRDAHRNLKHTENTPQRRTRQKLDFAGANSSAAETHKDSPEPDKKATASPSGTLGKARTQRLLESLRENKYPARDTKKNLAEELGITVRQVSKWFENARRSLRQANIRASRVGIASPNKDTILTRTNGKVLEPEPKNLANDGASNGVESKELAKAGTVEMPCCSMDVERRCMTGEPSPQKSMSPKLRNRGNDMIDHRTSNKALGTKETDSPGAQAARRNGQNTNQEVTRLQVRTRSRKAVA* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01102 784 MobiDBLite consensus disorder prediction 545 562 - -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 478 496 - -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 65 79 - -
Eupl03g01102 784 SMART PHD_3 229 282 IPR001965 -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 63 85 - -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 97 130 - -
Eupl03g01102 784 ProSiteProfiles 'Homeobox' domain profile. 588 648 IPR001356 GO:0003677
Eupl03g01102 784 SUPERFAMILY FYVE/PHD zinc finger 220 287 IPR011011 -
Eupl03g01102 784 CDD homeodomain 602 646 IPR001356 GO:0003677
Eupl03g01102 784 MobiDBLite consensus disorder prediction 747 773 - -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 313 617 - -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 732 746 - -
Eupl03g01102 784 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 286 IPR013083 -
Eupl03g01102 784 Gene3D - 592 654 - -
Eupl03g01102 784 ProSitePatterns 'Homeobox' domain signature. 623 646 IPR017970 GO:0000981|GO:0006355
Eupl03g01102 784 SUPERFAMILY Homeodomain-like 596 647 IPR009057 -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 715 784 - -
Eupl03g01102 784 CDD PHD_PRHA_like 229 281 IPR045876 -
Eupl03g01102 784 SMART HOX_1 585 652 IPR001356 GO:0003677
Eupl03g01102 784 Pfam PHD-finger 229 284 IPR019787 -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 352 368 - -
Eupl03g01102 784 ProSiteProfiles Zinc finger PHD-type profile. 227 284 IPR019787 -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 391 406 - -
Eupl03g01102 784 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 61 775 - -
Eupl03g01102 784 ProSitePatterns Zinc finger PHD-type signature. 230 281 IPR019786 -
Eupl03g01102 784 FunFam pathogenesis-related homeodomain protein-like 221 281 - -
Eupl03g01102 784 MobiDBLite consensus disorder prediction 525 544 - -
Eupl03g01102 784 Pfam Homeodomain 601 644 IPR001356 GO:0003677
Eupl03g01102 784 MobiDBLite consensus disorder prediction 452 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01102 Eupl-Chr3 35090342 35111092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01102 110 645 Homeobox Transcription Factor Family AT3G19510 46.786 1.07e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Eupl03g01102 PHD 3.8e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01102 - - nnu:104607529 785.793