Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01095 ATGCAAATGATTCAGGAGGATTGCTCTTACTTGATGGTGGAGAACGGCTTCTTCCCAAGAGATAAAATGGCACAAGCAAAGCCTTTTATGATCAAGGGCCAATGGACCCTAGAGGAAGACCAACTGCTAATGAGTCTAGTGGAGCAATATGGGGTAAAGAGATGGTCTCATATAGCAAGGATGCTCGTTGGAAGAGTCGGAAAACAATGCCGGGAGCGATGGCATAACCATCTCCGTCCCAATATCAAGAAAGAAGCATGGAGTGAAGATGAGGAAAAGGCTTTGGTGAAGGCACATGCAGATGTAGGAAACAAGTGGGCTGAGATAGCAAAGAGGATCCCTGGAAGAACCGAGAATTCAATCAAAAACCACTGGAATGCAACCAAAAGGAGGCAAATATCGAAACGCAAGTGTCGGAAGGCAGGCTGGAGCCAAAACAACGGGCATCCCATCTCAATTTTGCAAGAGTATATGAGGAGTAGGGGCTTGCTCATGGAGAAAAGCAAGGAAAAGCCAAAAAAGGAAAACAAAGAAAGCTATGCTCTGAACACATCATTGAAAGGCAAGGAAAAACAATGCCTGGAAACCAAAGAAAACTATGCGCGGAACGCCCTATTTCCATCATTGGTGAAAGAGGATATGCATAACATGGTGAGCAACATTGCGGGTGAGCAAAACTATGCGATATTCGAAGACATGGACCTCTCTTGCTTCTTCTCGTGGCCTAGTTCGTCGCCGCCTTCATCTTCTGCTTTTGTATCTGGTCTACAAGATACAAACCTTAGTTTGGTAATCCAAGAAATCCCAAACGAATTGGATACTGCGAAGAAGGAATTGGACTTAGTAGAGATGGTTTCCTCCTCGGTGAATATGTCCGACTGGTAA 885 0.4486 MQMIQEDCSYLMVENGFFPRDKMAQAKPFMIKGQWTLEEDQLLMSLVEQYGVKRWSHIARMLVGRVGKQCRERWHNHLRPNIKKEAWSEDEEKALVKAHADVGNKWAEIAKRIPGRTENSIKNHWNATKRRQISKRKCRKAGWSQNNGHPISILQEYMRSRGLLMEKSKEKPKKENKESYALNTSLKGKEKQCLETKENYARNALFPSLVKEDMHNMVSNIAGEQNYAIFEDMDLSCFFSWPSSSPPSSSAFVSGLQDTNLSLVIQEIPNELDTAKKELDLVEMVSSSVNMSDW* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01095 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 82 IPR017930 -
Eupl03g01095 294 CDD SANT 86 129 IPR001005 -
Eupl03g01095 294 FunFam Transcriptional activator Myb isoform A 31 84 - -
Eupl03g01095 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 133 IPR017930 -
Eupl03g01095 294 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Eupl03g01095 294 Pfam Myb-like DNA-binding domain 35 95 - -
Eupl03g01095 294 CDD SANT 35 78 IPR001005 -
Eupl03g01095 294 Gene3D - 31 83 - -
Eupl03g01095 294 SMART sant 31 80 IPR001005 -
Eupl03g01095 294 SMART sant 83 131 IPR001005 -
Eupl03g01095 294 Gene3D - 85 149 - -
Eupl03g01095 294 ProSiteProfiles Myb-like domain profile. 27 78 IPR001005 -
Eupl03g01095 294 PANTHER MYB PROTEIN-RELATED 32 175 - -
Eupl03g01095 294 SUPERFAMILY Homeodomain-like 30 125 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01095 Eupl-Chr3 34931205 34932345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01095 30 168 MYB Transcription Factor Family AT4G18770 64.085 3.36e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl03g01095 Myb_DNA-bind_6 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01095 K09422 - msin:131229410 271.552