Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01081 ATGTTGCACTCGTGTTGCAGACCACTGGAGAGATGTTTCGGGAGAGGAGGAGATGGTCTTCTCTGGCACATGGACTTAAAACCCCACGCGTCAGGAGACTTCTCGATCGCAGTGGTGCAAGCCAATTCCTCCCTTGAAGACCAAAGCCAAGTCTTCACCTCCCCCTCCGCCACCTACGTTGGCGTCTACGACGGCCATGGCGGACCAGAAGCATCTCGCTTCATCAACAATCACCTCTTCCCCCATCTCCACAAATTTGCTTCGGAACAAGGGGGATTATCGGCTGATGTTATAAAGAAGGCGTTTGATGCGACGGAGGAGGAATTTTTGCATTTGGTGAAGCGGTCGTGGCCGGCACGGCCACAGATTGCTTCCGTGGGATCGTGTTGTTTGGTGGGAGCCATTTCTAATGATATCTTGTATGTGGCGAATCTCGGTGACTCGAGGGCGGTTCTTGGACGGAGAGTTTCAGAGGGAAGAAGGAATCAGGTGGTGGCGGAGCGGTTATCGACTGATCATAATGTTGCGGTAGAGGAGGTGAGGAAGGAGGTTGAGGCACTTCATCCCGATGATTCACATATTGTGGTGTATAGTCGCGGAGTTTGGCGGATTAAGGGCATAATTCAGGTTTCAAGATCTATTGGAGATATCTATCTGAAGAAACCCGAGTTCAATAGGGATCCTCTTTTCCAGCAATTTGGATCTCCTGTTCCTCTGAAACGGCCTGTGATGACAGCAGAACCCTCGATCTTGGTAAGAAAGATAAGGCCGCAGGACTTGTTCTTGATATTTGCTTCAGATGGCCTCTGGGAGCAACTGAGTGATGAAGCCGCTGTAGAGATCGTCTTCAAAAACCCAAGAGCCGGTATAGCAAAGCGTTTAGTGAGAGCTGCTCTTCAGGAAGCCGCGAAGAAGAGGGAAATGAGATACGACGACATAAAAAGGATTGAGAAGGGGATTAGGCGCCATTTCCATGATGACATCACTGTGATCGTGATGTTTCTCGATCACCACCAAGGCTCCCCCAATGGTAGATTCAAGGAGCATAGCACTGTTGACTGCACTAGCGCTCCCGTTGATATTTTTTCTCTCAACACGGATGAAGCGGAGGACCCGCTTAACGCCGTTCCCTGA 1134 0.5026 MLHSCCRPLERCFGRGGDGLLWHMDLKPHASGDFSIAVVQANSSLEDQSQVFTSPSATYVGVYDGHGGPEASRFINNHLFPHLHKFASEQGGLSADVIKKAFDATEEEFLHLVKRSWPARPQIASVGSCCLVGAISNDILYVANLGDSRAVLGRRVSEGRRNQVVAERLSTDHNVAVEEVRKEVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDIYLKKPEFNRDPLFQQFGSPVPLKRPVMTAEPSILVRKIRPQDLFLIFASDGLWEQLSDEAAVEIVFKNPRAGIAKRLVRAALQEAAKKREMRYDDIKRIEKGIRRHFHDDITVIVMFLDHHQGSPNGRFKEHSTVDCTSAPVDIFSLNTDEAEDPLNAVP* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01081 377 ProSitePatterns PPM-type phosphatase domain signature. 59 67 IPR000222 GO:0043169
Eupl03g01081 377 Gene3D - 25 342 IPR036457 -
Eupl03g01081 377 Pfam Protein phosphatase 2C 54 304 IPR001932 -
Eupl03g01081 377 ProSiteProfiles PPM-type phosphatase domain profile. 33 335 IPR001932 -
Eupl03g01081 377 SMART PP2C_4 27 333 IPR001932 -
Eupl03g01081 377 PANTHER PROTEIN PHOSPHATASE 32 333 IPR015655 GO:0004722|GO:0006470
Eupl03g01081 377 SUPERFAMILY PP2C-like 40 337 IPR036457 -
Eupl03g01081 377 CDD PP2Cc 40 335 IPR001932 -
Eupl03g01081 377 FunFam Probable protein phosphatase 2C 42 24 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01081 Eupl-Chr3 34629383 34634275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01081 18 341 PP2C-type Phosphatase Gene Family AT3G51370 60.241 7.59e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01081 K01102 - nnu:104607810 672.93