Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01064 ATGGCGTTCTTTGCTGTAAAAACTGCTCGATTGGCGATTACAAAACGTTGGTTTAGTTCAGATTCCGCCGCAAACGAATTCGCGGGAAAAAACGCCTACGACGTCTTAGGGGTTTCAGAAACCAGCAGCTTCGCTGAAATCAAAGCATCTTTCCGAAAATTGGCCAAAGAAACTCATCCAGACCTCTTAGGCTCTGCCCCCAATACAACCGCTTCTCAACGATTCGTTCAAATCCTCGCAGCTTATGAGATTCTTTCAGATTCTGAGAAGAGGGCCCATTACGACATGTATCTGTTCTCTCAGAGAAAGGTTATGAAGAAACATTCCAGACAAGGTTCAGCTATGTACACATATGAATCTCATATAACAACACCAAAACATATGGAAGTCGTTGAATGGCTAAAATGGTACAGATTTGCTATCAATGACATTGTGTCACAGACACAGGAGAAGGTGGTGGTTGGCTCAGGTTATTTTGATATTCTTGAGGGGGAATTTTATTCAGCTATAAATGCAGCTTATTATGGCCCTATCATTGAGTCTATGGATCTTCTTCCAGAATGTTTTGAAGCTGAGGAAAGGTCCGTATATGGAACTCCCGAGGTGTTTCACTTGGTTTCAGGGCGCGATCTTTTCGGTATTGTATGCATAGTCAAAAAGCTTCCTGAATTATCACATGCATGCCATGAAAAATTAACTTCTTTTACATCAGTGGATTTTGGCCTTTGTCGATCTATTAAGGATACAGGAATCAACAAGAATTCTGGATCATTGGGTAATGCAGAGACCCCACAGATGCAAATCAGACATCATATGGATCATGCATCAGATGTTTATAAAGATCTAGAATTGCATATTTCCGGAAGGGTGGTTGCTGTGGCCACTAGAATCCCTCCTAAAAGCTGTTGTGATGGGTTTCAAAACGAAGATTCTCAAGACCACATACATGTTTTTCTTAGTTCACATGAATATCCAATGTACGCCAGCAAAAAGTTGTCTGTGCACTCTTTTTCGGGTAGTTCAGTTGGATCAAGGATTCTACTGGGAACAATAACTGGACTAGGGACAAACCCAGAAGAAGGGTCCTGCTTTGTCTACAATAATAGTGGTACAAACACTCACGTGATTATGAAACATAGAACATTACTGGTGAAGCACATGCACTGGTATCAAGTTGGAGATGAAGTTTCTGTTTGTGAATGTAGATGCAGCAGAGCGCGGTTACCACCAAGCAAATTTTGGCTGTTTGAGCCTCGCTGCGGCATGCATGATATCGGTGGTTGGTATGTTGAAACATTTGGTCGAGATAAGAAAGGCAGGACAGTCCCATCCCAAAGGCAGTGGGATGGCTTTGATGCAATTGAACAGCCTGAGAAGAGACTCCATCCTGCAATGTATTTGTTAGCTCTTGCATATAGAACTCTAGACCTTGAAGATGCGAAAAGAAGGAAACGGACAATTCGGGATATTGTTGAACCAAAACTGTTTAGTGTTCTCCGATGGTGCAAGAAACTTGTTTAA 1521 0.4195 MAFFAVKTARLAITKRWFSSDSAANEFAGKNAYDVLGVSETSSFAEIKASFRKLAKETHPDLLGSAPNTTASQRFVQILAAYEILSDSEKRAHYDMYLFSQRKVMKKHSRQGSAMYTYESHITTPKHMEVVEWLKWYRFAINDIVSQTQEKVVVGSGYFDILEGEFYSAINAAYYGPIIESMDLLPECFEAEERSVYGTPEVFHLVSGRDLFGIVCIVKKLPELSHACHEKLTSFTSVDFGLCRSIKDTGINKNSGSLGNAETPQMQIRHHMDHASDVYKDLELHISGRVVAVATRIPPKSCCDGFQNEDSQDHIHVFLSSHEYPMYASKKLSVHSFSGSSVGSRILLGTITGLGTNPEEGSCFVYNNSGTNTHVIMKHRTLLVKHMHWYQVGDEVSVCECRCSRARLPPSKFWLFEPRCGMHDIGGWYVETFGRDKKGRTVPSQRQWDGFDAIEQPEKRLHPAMYLLALAYRTLDLEDAKRRKRTIRDIVEPKLFSVLRWCKKLV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01064 506 PRINTS DnaJ domain signature 51 66 IPR001623 -
Eupl03g01064 506 PRINTS DnaJ domain signature 33 51 IPR001623 -
Eupl03g01064 506 PRINTS DnaJ domain signature 70 90 IPR001623 -
Eupl03g01064 506 SUPERFAMILY Chaperone J-domain 29 101 IPR036869 -
Eupl03g01064 506 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 17 505 - -
Eupl03g01064 506 CDD DnaJ 31 87 IPR001623 -
Eupl03g01064 506 Pfam DnaJ domain 31 95 IPR001623 -
Eupl03g01064 506 SMART dnaj_3 30 90 IPR001623 -
Eupl03g01064 506 ProSitePatterns Nt-dnaJ domain signature. 75 94 IPR018253 -
Eupl03g01064 506 ProSiteProfiles dnaJ domain profile. 31 98 IPR001623 -
Eupl03g01064 506 Gene3D DnaJ domain 20 121 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01064 Eupl-Chr3 34420609 34427793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01064 33 97 C2H2 Transcription Factor Family AT1G74250 44.118 1.99e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01064 - - psom:113287768 746.503