Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01057 ATGAAAGATGCGCACAATCTTGTTTTACTTCTCCGTTTTTTGCTAGTGGGCACGCTGGTGGCATTGTATGTGCCGGTAGCGCAGCCTCCCAACCTACGCCCCTCCTCCTCCCTCGTCCGCGCTTCGTACAACAACGAGAGCACCATCAACAACAACAACGATAACACCAACAAGATCAACTTGATCGAGATCGGTGATTCAACTCTTGCCGCCATGTCCAAGGCTCGAGTCTACGCTGACGTCAATGTTCTCCGCCCAAAAGAATACTGGGACTACGAGTCTCTCACCGTTCAGTGGGGTGATCAGGATGACTATGAGGTTGTACGGAAAATCGGTAGGGGAAAATACAGTGAGGTCTTTGAAGGTATAAACACCACTAGCCATGAGCGGTGCGTCATCAAGATCCTCAAGCCTGTCAAGAAAAAGAAGATAAAGAGGGAGATAAAAATACTTCAGAACCTTTGTGGAGGCCCAAATATTGTGAAGCTGTTTGATATTGTCAGAGATCAGCACTCAAAAACTCCTAGCTTGATATTTGAATATGTGAACAGTACAGATTTTAAAATCTTATACCCCACGCTGACAGATTATGATATACGATACTACATATATGAGCTTCTCAAGGCATTAGATTACTGCCATTCACAAGGAATTATGCATAGAGATGTCAAGCCTCACAATGTTATGATAGACCACGAGCTGCGTAAACTTCGCTTAATAGATTGGGGTCTTGCTGAGTTCTACCATCCGGGCAAGGAATATAATGTGCGTGTAGCTTCAAGATACTTTAAAGGGCCTGAACTTCTTGTTGATTTGCAAGATTATGACTATTCTTTGGACATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATATTTCGCAAGGAGCCATTCTTTTATGGTCACGACAACCATGATCAGCTTGTCAAAATTGCCAAGGTACTTGGAACAGATGAGTTAAATGCATATTTAAATAAATACCACTTGGAGCTTGATCCTCAGCTTGATGCTCTTGTTGGGAGGCATAGCAGGAAGCCATGGTCCAAATTTATTAATGCGGATAATCAGCACCTGGTTTCTCCAGAGGTCATTTTTTTCCCAGCCATTGATTTCCTCGATAAACTTCTTCGATATGATCATCAGGATAGACTCACAGCAAGAGAAGCTATGGTCCATCCATACTTATTTCAAGTGAGGGCTGCAGAGAATAGCAGGATGCGGACGCAGTAA 1230 0.4366 MKDAHNLVLLLRFLLVGTLVALYVPVAQPPNLRPSSSLVRASYNNESTINNNNDNTNKINLIEIGDSTLAAMSKARVYADVNVLRPKEYWDYESLTVQWGDQDDYEVVRKIGRGKYSEVFEGINTTSHERCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLFDIVRDQHSKTPSLIFEYVNSTDFKILYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEVIFFPAIDFLDKLLRYDHQDRLTAREAMVHPYLFQVRAAENSRMRTQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01057 409 Gene3D Transferase(Phosphotransferase) domain 1 182 395 - -
Eupl03g01057 409 Gene3D Phosphorylase Kinase; domain 1 105 181 - -
Eupl03g01057 409 Pfam Protein kinase domain 105 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01057 409 FunFam Casein kinase II subunit alpha 91 181 - -
Eupl03g01057 409 SMART serkin_6 105 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01057 409 SUPERFAMILY Protein kinase-like (PK-like) 98 399 IPR011009 -
Eupl03g01057 409 CDD STKc_CK2_alpha 86 394 IPR045216 GO:0004674|GO:0006468
Eupl03g01057 409 ProSiteProfiles Protein kinase domain profile. 105 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01057 409 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Eupl03g01057 409 PANTHER CASEIN KINASE II SUBUNIT ALPHA 47 404 IPR045216 GO:0004674|GO:0006468
Eupl03g01057 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Eupl03g01057 409 FunFam Casein kinase II subunit alpha 182 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01057 Eupl-Chr3 34303891 34345325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01057 103 395 Core Cell Cycle Gene Families AT1G76540 28.750 1.58e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Eupl03g01057 Pkinase 7.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01057 K03097 - nnu:104607978 692.96