Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01048 ATGGGGCATTCGAATGTATGGAACTCACACCCGAAGAATTACGGGCCTGGTTCTCGTGCTTGCCGAGTTTGTGGGAACCCTCATGGGTTGATCAGGAAATATGGTCTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATCGGCTTCATCAAGCGAGCAATTGGGCAGATGAATCTGTGTTCAGGAAAAGATGGAGAACAAATTTTAGAAATATTATTTGGAGCAGACATGCCTGAAATAAATGTTAGAGGAGTGAAAATGGGGATTGACTAG 282 0.4504 MGHSNVWNSHPKNYGPGSRACRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKRAIGQMNLCSGKDGEQILEILFGADMPEINVRGVKMGID* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01048 93 Gene3D 30s Ribosomal Protein S14; Chain N 1 55 IPR043140 -
Eupl03g01048 93 FunFam 40S ribosomal protein S29 1 56 - -
Eupl03g01048 93 PANTHER 40S RIBOSOMAL PROTEIN S29 1 55 IPR039744 GO:0003735|GO:0008270
Eupl03g01048 93 Pfam Ribosomal protein S14p/S29e 7 54 IPR001209 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01048 Eupl-Chr3 34163074 34171208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01048 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 4.55e-33 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01048 K02980 - jre:109014206 126.331