Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01047 ATGATGCAATTCACTGAAACCCCACCACCTCCTTTCCACCAAAATGCAATTAGTCCATGTTCAAATCTCTCCATGAACAAGAACCCATTTCAGCGAGCTCGTCCATGGCCTGGTTTTCCTACATCCAAGGCTCTAGGAAGCTTTGGTGACGCCAATTGCATGGAACAGCTACTTGTGCACTGTGCAAACGCAATCGAAAGCAACGACGCCACTCTAGCCCAACAAATCCTATGGGTCTTGAACAACACCGCACCCCCCGACGGCGACTCCAATCAACGCCTCACTTGTGGCTTCCTGCGTGCTCTTATTACCCGTGCAGCCAAGACTGGTTGTTGCAAAATGCTTACAGCCATGGCCAACGCCAACGCCAATCTCGCCATACACACCCATAAGTTCTCCGTCATTGAGCTCGCTAGCTTCATCGACCTCACTCCATGGCATCGCTTCGGCTTCTCCGCTGCAAATGCTGCAATCTTAGAAGCAATCGAAGGCTTCTCCGTCGTCCACATTATTGATCTAAGCTCCACTCATTGCATGCAAATCCCCACACTCATCGATGCAATTGCAAGCCGTCCTGAAGGCCCACCTCTTATCAAACTCACCATCGCCGGTGCAACCTCAGATGTCCCACCCATGCTCGACCTCTCTTATGAGGAGTTGGGATCAAAACTTGTGAATTTTGCAACGTCTCGAAATGTAGGACTGGAGTTTAGAGTGATTCCTTCAAGTTCTTCAGATGGGTTTTCATCCTTGATTGAACAAATTCGAGTGCAACAACTAGTCTTTGCTGACGGAGGTGAAAGTGAAGCTCTTGTTATAAACTGTCACATGATGCTTCACTACATACCAGAAGAAACCCTAGGTGCAGTCATCTCTAATATAAACCATACTACGTCTCTTCGAAGCATGTTTCTTAAGGCTCTTCGCAGTTTAGATCCTACAATTGTTGTTCTAATAGACGAAGATGCGGATTTCACTTCCAATAACTTGGTTTCTAGGTTGAGATCCGCTTTTAATTTTCTATGGATACCTTATGATGCTGTTGATACGTCTCTCCCTGGAGGGAGCAAGCAGAGGCAGTGGTACGAGGCTGATATGTGTTGGAAAATCGAGAATGTGATCGCACAGGAGGGTATGCAGAGGGTGGAGCGACTTGAACCTAAAAGCAGGTGGGTGCAGCGGATGAGAAATGCAAACTTTCGGGGTGTTCCATTTAGTGAAGATGCAGTATCGGAGGTGAGGAGCATGCTTGATGAACATGCGGCTGGGTGGGGATTGAAGAAGGAAGAAGAAGATCTTGTGCTCACATGGAAAGGACATAATGCTGTGTTTGCTACAGCTTGGTTACCTGCATGA 1356 0.4742 MMQFTETPPPPFHQNAISPCSNLSMNKNPFQRARPWPGFPTSKALGSFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNTAPPDGDSNQRLTCGFLRALITRAAKTGCCKMLTAMANANANLAIHTHKFSVIELASFIDLTPWHRFGFSAANAAILEAIEGFSVVHIIDLSSTHCMQIPTLIDAIASRPEGPPLIKLTIAGATSDVPPMLDLSYEELGSKLVNFATSRNVGLEFRVIPSSSSDGFSSLIEQIRVQQLVFADGGESEALVINCHMMLHYIPEETLGAVISNINHTTSLRSMFLKALRSLDPTIVVLIDEDADFTSNNLVSRLRSAFNFLWIPYDAVDTSLPGGSKQRQWYEADMCWKIENVIAQEGMQRVERLEPKSRWVQRMRNANFRGVPFSEDAVSEVRSMLDEHAAGWGLKKEEEDLVLTWKGHNAVFATAWLPA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01047 451 ProSiteProfiles GRAS family profile. 45 449 IPR005202 -
Eupl03g01047 451 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 438 IPR005202 -
Eupl03g01047 451 Pfam GRAS domain family 54 448 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01047 Eupl-Chr3 34161354 34162709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01047 39 450 GRAS Transcription Factor Family AT3G49950 60.817 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl03g01047 GRAS 6.8e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01047 - - nnu:104608084 771.541