Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01044 ATGAGTTGCAATGGCTGTCGAGTTCTTCGAAAGGGATGCAGCGAGTCTTGCATTCTCCGGCCGTGTCTGCAGTGGATCGAGAGTCCTGAAGCTCAAGGTCACGCTACCGTCTTTGTAGCCAAGTTTTTCGGCCGTGCCGGTCTCATGTCCTTCATTTCTGCCGTACCGGAAAACCAGAGACCTGCTTTGTTTCAATCTCTCTTGTACGAGTCGTGTGGTCGTACGGTGAATCCTGTGAACGGAGCGGTAGGACTTCTTTGGACGGGGAACTGGCACGTGTGCCAATCGGCGGTGGAGACAGTCCTTCGAGGCGGCACTTTACGGCCGATCTCTGAGGTTTTGGGAGGAATTCTGACGCCAGAATCTGATGACGCATCAGAAGCTGAAGTTGGCAATACAGATATGGAGAAGCTACGAGATCCGTATTTCCGATCGAAGATTTCGAAGAGGAAGGGATTTGACGACGTGGCTAAATTACAACCGAGCGATCTGGATCTATCCTTGACGCCTGGATTTCCTAAGAAGGTTTCCACAGGCGGAGGAATGATGACTAAGCGGCGACCGACGACACCGTCGATGAATTCGGAAGAATCAGTGACGACGAGCTTCGACAGCGGCGTTGCTGGAGATAACAATCGTGGGGAACGAAAGCTTCTGAATTTGTTCCTATAA 672 0.5149 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPENQRPALFQSLLYESCGRTVNPVNGAVGLLWTGNWHVCQSAVETVLRGGTLRPISEVLGGILTPESDDASEAEVGNTDMEKLRDPYFRSKISKRKGFDDVAKLQPSDLDLSLTPGFPKKVSTGGGMMTKRRPTTPSMNSEESVTTSFDSGVAGDNNRGERKLLNLFL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01044 223 MobiDBLite consensus disorder prediction 170 211 - -
Eupl03g01044 223 MobiDBLite consensus disorder prediction 183 208 - -
Eupl03g01044 223 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Eupl03g01044 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 222 - -
Eupl03g01044 223 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01044 Eupl-Chr3 34108063 34109235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01044 1 222 AS2 family AT3G49940 58.824 7.04e-87 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl03g01044 LOB 7.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01044 - - nnu:104611634 348.591