Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01041 ATGGCCGCAAGGCCTCTGCTTTTCAATATTCCCCATCGTCTACTCTTCTTCTTCTTCCGTTCGACACATCTACCTCCTTGTGCTCCTCCTCCATCTCTACATCCTCTCGACCTCCGGAGGACCGTGTACGGGCCCTCAATCTTCCACCCAGAACAAGTACAACAAAAACCATCAAATCACCACCGTTCATCACCCGCATCGGAAAACCTGGCGCAGAGAATCGGGAAATCCATTCGTAAGCCCGGGGCCACCTCTAAGGCCAGGGTTCATGCCGACGTTAACGTCATCCGTCCCAAGGAATATTGGGATTACGAGTCCCTTACCGTCCAATGGGGGGAGCAGGACGATTACGAAGTCGTAAGGAAGATCGGGAGGGGGAAATACAGCGAAGTCTTCGAGGGCGTTCATTGCACCAACAACGAACGCTGCGTTATTAAGATCCTCAAGCCTGTAAAGAAAAAGAAGATCAAGAGGGAGATAAAAATATTGCAGAACCTTTGTGGTGGTCCAAATATTGTGAAATTGTTGGATATCGTCAGAGATCAGCAATCAAAGACCCCCAGTCTAATATTCGAATATGTGAACAACACCGATTTTAAAGTGCTTTATCCGACATTGACAGACTATGATACCAGATATTACATCTATGAGCTGTTGAAGGCGTTAGACTATTGTCACTCACAGGGTATTATGCACCGAGATGTGAAGCCCCACAATGTCATGATTGATCATGAGCAGCGTAAGCTTCGTCTCATAGATTGGGGGCTTGCAGAGTTCTATCATCCGGGGAAAGAATACAATGTTCGTGTTGCTTCAAGATATTTTAAAGGCCCGGAGCTTCTTGTTGATTTGCAGGACTATGATTACTCTTTAGACTTGTGGAGCCTTGGTTGTATGTTTGCCGGAATGATATTCCGCAAGGAGCCATTTTTCTATGGGCATGATAATTATGATCAACTGGTCAAAATAGCTAAGGTACTCGGGACAGACGAATTAACCGTGTATCTAAACAAATACCGCTTGGAGTTGGACCCCCACCTTGAGGCCCTTGTTGGAAGGCATAGCAGGAAGCCGTGGATGAAGTTCATTAATGCTGATAATCAACATTTGGCAGTTCCTGAGGCGGTGGATTTTCTTGACAAGTTGCTGCGATATGATCACCAAGAAAGGCCGACTGCAAAAGAAGCAATGCAATTTTCTGGTTCTAGCTCTAGATCTGAAAACAAAGATACTCCACTTAGTTCGACTTTTCAGCTGCACCCCATGCAACACTTGGCCACCCTTTTGAGCAGTACAGACAGATATGTTGGACAACCTTATGTACAATGCTCATCCTTATTTTTATCCCGTGAGAAGTGCAGAAAGCAGCAGGACCCGTCCCCAGTAGTTTGA 1392 0.4591 MAARPLLFNIPHRLLFFFFRSTHLPPCAPPPSLHPLDLRRTVYGPSIFHPEQVQQKPSNHHRSSPASENLAQRIGKSIRKPGATSKARVHADVNVIRPKEYWDYESLTVQWGEQDDYEVVRKIGRGKYSEVFEGVHCTNNERCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLTDYDTRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELTVYLNKYRLELDPHLEALVGRHSRKPWMKFINADNQHLAVPEAVDFLDKLLRYDHQERPTAKEAMQFSGSSSRSENKDTPLSSTFQLHPMQHLATLLSSTDRYVGQPYVQCSSLFLSREKCRKQQDPSPVV* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01041 463 MobiDBLite consensus disorder prediction 51 71 - -
Eupl03g01041 463 CDD STKc_CK2_alpha 98 398 IPR045216 GO:0004674|GO:0006468
Eupl03g01041 463 PANTHER CASEIN KINASE II SUBUNIT ALPHA 57 400 IPR045216 GO:0004674|GO:0006468
Eupl03g01041 463 Gene3D Phosphorylase Kinase; domain 1 117 193 - -
Eupl03g01041 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Eupl03g01041 463 Gene3D Transferase(Phosphotransferase) domain 1 194 398 - -
Eupl03g01041 463 SUPERFAMILY Protein kinase-like (PK-like) 90 398 IPR011009 -
Eupl03g01041 463 ProSiteProfiles Protein kinase domain profile. 117 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01041 463 FunFam Casein kinase II subunit alpha 103 193 - -
Eupl03g01041 463 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Eupl03g01041 463 MobiDBLite consensus disorder prediction 393 415 - -
Eupl03g01041 463 MobiDBLite consensus disorder prediction 395 415 - -
Eupl03g01041 463 SMART serkin_6 117 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01041 463 Pfam Protein kinase domain 117 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g01041 463 FunFam Casein kinase II subunit alpha 194 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01041 Eupl-Chr3 34053169 34078964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01041 115 398 Core Cell Cycle Gene Families AT3G48750 32.095 1.65e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Eupl03g01041 Pkinase 5.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01041 K03097 - nnu:104611631 673.315