Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01034 ATGGAGCCTGTGGGAACCTTGTCTGAGGGGGAATGGAGCTCTTTTAGTGGAATGTTCTCCACTGAGGAGGCTGATTTCATGGCACAGTTACTTGGTAACTATCCGTTTCCGACCGAGCAAAGTGGGGGTCCAAGCTTGGGAACCCCATCTACTTTTTGGCCCAATCATGAACCTACCATGAACAAGGCAGGGAGTGATGAGAATTCATATTATTGTTCAGATACTGTTAACTCTAATTCATACTATTTTCCTCAAGGGAGTAGTTATAGTAGTGGTAGTAGTCTCTTTTTCCCCACTTTGGGCCATGAAAACTACTACGTAAGCGATTCTAATCCAATTTTGGTGACCAATAATAGTTCTGTGTCCATGGATTATTGTATGGTGGATGAGCAGAACACCACCTTGTCAATTAAAGCATTGCCTGACAATCTAATGGAAGAGGCTGTTTGCTTGAACGAAGAGATGAGCAGTGGCAGTTTGAGAGAGTCCGGTGGAACCCCACCGGAAACTGTTGTTCTTCCAGATCAGAAAATGCAGCCGAAAAGGAAATTCGAGATGCCAGAACCAGATACAGCCACAGATGATAAAAACAACACCGACTCATCCAAGAGTCCTAAGAAGAAATCTCGGGTTTCAGGAGATGTCCAAAGGAACAAGAAGAATGTACAGTCGAAGAAGAATCTGAAGCTCGCGTCAATTAGTAACGATGAAGAAGAGACTAATGCTGGTTTGAATGGGCAGAGCTCTAGCAGTTACTGCTCGGAGGATGACTCCAATGCTTCTCAGGAGCTAAATGGAGGAGCAACTTCAAGCTCCAAAGGGTCTGCAGTTCTCAACTCGAATGGTAAAGCAAGAGCCAATAGGGGGTCAGCCACCGACCCGCAAAGCCTATATGCAAGGAAAAGAAGAGAGAGAATAAATGAACGGTTGAGAATCTTGCAGAACCTGGTCCCTAATGGAACAAAGGTTGACATCAGCACAATGCTTGAAGAAGCTGTTCAGTATGTTAAGTTTTTGCAGCTCCAAATCAAGCTCTTAAGCTCTGATGATCTATGGATGTATGCTCCAATTGCATACAACGGAATGGACATTGGGCTCGATCTGAAGATCTCGTCATCACGATGA 1125 0.4453 MEPVGTLSEGEWSSFSGMFSTEEADFMAQLLGNYPFPTEQSGGPSLGTPSTFWPNHEPTMNKAGSDENSYYCSDTVNSNSYYFPQGSSYSSGSSLFFPTLGHENYYVSDSNPILVTNNSSVSMDYCMVDEQNTTLSIKALPDNLMEEAVCLNEEMSSGSLRESGGTPPETVVLPDQKMQPKRKFEMPEPDTATDDKNNTDSSKSPKKKSRVSGDVQRNKKNVQSKKNLKLASISNDEEETNAGLNGQSSSSYCSEDDSNASQELNGGATSSSKGSAVLNSNGKARANRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKISSSR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01034 374 Gene3D - 288 347 IPR036638 GO:0046983
Eupl03g01034 374 CDD bHLH_AtIND_like 291 353 - -
Eupl03g01034 374 MobiDBLite consensus disorder prediction 155 301 - -
Eupl03g01034 374 FunFam Basic helix-loop-helix transcription factor 291 348 - -
Eupl03g01034 374 Pfam Helix-loop-helix DNA-binding domain 300 340 IPR011598 GO:0046983
Eupl03g01034 374 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 290 339 IPR011598 GO:0046983
Eupl03g01034 374 MobiDBLite consensus disorder prediction 225 294 - -
Eupl03g01034 374 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 289 355 IPR036638 GO:0046983
Eupl03g01034 374 MobiDBLite consensus disorder prediction 176 221 - -
Eupl03g01034 374 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 85 363 - -
Eupl03g01034 374 SMART finulus 296 345 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01034 Eupl-Chr3 33940093 33941713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01034 10 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 43.700 2.25e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl03g01034 HLH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01034 - - ming:122090569 423.705