Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01030 ATGAAAGCTTCTCTTAGCCTTTTATTCCTTCTGTCACTGTCTCTTTCTTTCATTTTAGAACCTTCAAAAGGAATCCGTGAATTTCAAAATTTGGATGACAATGGTCACAGGAGAATTCTACACCAGCCATTGTACCCAGTTGGTACAACACCTCCACCTGCAGCAGAGCCTCCGCCAGAAAGCTCAGATACCCCAGACCCCGACCAGCCTTTTTTCCCTGAGGTCCCAATTGGGTTGACCCCAGATCAGACCCAAACCCCCCCTGCTCCTGCCACTGGCTCCACCCCAATTCCGCTTGCAACACAGCCTACCAACCCAACAAAAAAAGTTGCTATAGCGATCTCTGTAGGGATAGTCACACTGGGTATGGTCTCGGCATTAGCTTTCTTCTTGTATCGACACCGGGTGAAACACCCGGCTGAATCTCAGAAGCTTGTTGGAATTAATTCCGAACGGTTTCCGCATGAATCAGCAGCGCCTGCTTCTGACCTTCTCTACCTAGGAACTATGGAGCCTTCGAATCGGCGAAGCAGCAGCGAGGTAAACGGATCTACCGGATCTCCTTATCACAAATTAAGCTCGCTCTATAGATCAGAGCTGCATCGTCCAAGCCCCGAGCTTCAGCCGCTGCCACCGCTGACCAGGGCTACACGTGGAACTTCACCTCCAGCTCCAGCCATATCGTATGAGGCTCTATGTAGGACTTCTCCTTCGGCCATATCTTCTGAGGAGACATTTTACACTCCTCAGGGATCAGCTGCTGGGAATGGTGAGAGTCCATACACATCCGATTCCCGCCAGATTTTTCCATCCACCACCACTCCAGAGAGCACTGCAAAAGGTGTAATCCATACCAAGTCAAATCCCCACTCCCAAAGATCTTCTCCAAAATCACGTCTTTCAATTTCTCTGTCTGATGCGAATCAAGCAATTGTACCATCACCATCACTGCCACCTCCACCACCACCGCCGCCCCCTCTACCATTGCTGCCGCCACAAAAGTCCCAAGCCCAACATGGTGAACCTAAAACACCATCACCTCCGAAAAGGAGGGCAAATTTTCCATCACCACCTTCTCCACCGAATTTGGTGCTTCCACAGTCGGTGCATGACCCAGCTCCACAAGCAGCTAAAGTTCCAGTCCCGCCTCCGCCACCGCCTCCACCACCACCAACCACCCCAGGGAAAGTAAGACCTTCAGAAATGAGTGTTTCACCAAGGCCAGTTCGAGAATTGCCCAACCCTCAGTCTATGACGCCTACCCCCAAAGCCACCACTCAGGCTGAAATACCAGTGCCAGTTGCGGAGGTTACCCGAAGTGGCTGTTCTTCGGAGCCATGCAATGTGGTAGAAGATGCAGATGCAGATGCAGCAAAACCGAGGTTAAAGCCTTTGCACTGGGATAAAGTACGAGCAAGTTCAGATCGAGCTATGGTGTGGGATCAATTGAAATCAGGCTCTTTTCAATTGAACGAGAATATGATCGAGACTCTTTTTGGCTGCAATTCAAAAAACCCAGTTCAAAAAGAATCAACCAGAAGATCAGTTCTCCCTCCAGTCGAACAGGAGAACCGGGTGTTGGACCCAAAGAAGTCACAGAACATAGCTATACTTTTAAGGGCATTGAATGTAACACGGGATGAGGTGACCGAAGCACTTTTAGATGGTAATCCTGACGGTTTGGGTGCTGAGCTTTTAGAAACTTTGGTCAAGATGGCCCCGACCAAAGAGGAAGAACTAAAACTGAGAGACTACAGTGGTGACATATCGAAACTAGGATCTGCAGAGCGATTCCTCAAGGCGGTGCTGGATATACCATTTGCCTTTAAAAGAGTCGATGCCATGCTATACAGAGCCAATTTTGATGCAGAAGTAAAGTACTTGAGGACGTCTTTTGAAACCCTACAGGCAGCGTGCGAAGATTTGAAAAACAGTCGACTATTCCTAAAACTCCTAGAAGCTGTTCTCAGAACAGGGAATCGAATGAATGTTGGCACCAACCGGGGTGATGCAAGAGCTTTTAAGCTTGATACACTTCTAAAACTAGTAGATGTAAAAGGAATAGATGGGAAGACGACATTGCTCCATTTTGTGGTACAAGAGATTATTAGATCTGAAGGTACAGGTTCTGATCATACACCTGAGAATATTCTCAACAAAATGTACCCAAAAGTGGAGGATGATTTCAAGGTACAGGGTTTGCAGGTTGTGGCCGGACTGAGCAGAGAACTTGGCAATGTTAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTACGTGTCAAAGCTCGAAATGGGACTTGAGAAAGTCAGGTTGGTTTTGCAATATGATAAGTCAAATACACAGGGGAAATTCTTTGAGGCGATGAAGTTGTTTCTAAATGAAGCCGAAGAGGAGATCCTTAGGGTTAAGGCCGATGAAAGAAAGGCTTTATCCCACGTTAAAGAGGTCACACAGTATTTTCACGGAGATGCAGCAAAGGAGGAAGCTCATCCTTTAAGAATCTTCATGGTTGTCAGAGACTTCCTCTCTGTGTTGGATCAGGTATGCAAAGAAGTGGGAAAGATGCGGGACAGAACAATGGTGGGCGCTGCTAAATCCTTCCGGATACCTGCGAGTGCTTCATTACCAGTTCTCAATAGATTCAATATAAGACAAGATGGATGTTCAGATGAGGATAACTCGTGTCCATGA 2700 0.4733 MKASLSLLFLLSLSLSFILEPSKGIREFQNLDDNGHRRILHQPLYPVGTTPPPAAEPPPESSDTPDPDQPFFPEVPIGLTPDQTQTPPAPATGSTPIPLATQPTNPTKKVAIAISVGIVTLGMVSALAFFLYRHRVKHPAESQKLVGINSERFPHESAAPASDLLYLGTMEPSNRRSSSEVNGSTGSPYHKLSSLYRSELHRPSPELQPLPPLTRATRGTSPPAPAISYEALCRTSPSAISSEETFYTPQGSAAGNGESPYTSDSRQIFPSTTTPESTAKGVIHTKSNPHSQRSSPKSRLSISLSDANQAIVPSPSLPPPPPPPPPLPLLPPQKSQAQHGEPKTPSPPKRRANFPSPPSPPNLVLPQSVHDPAPQAAKVPVPPPPPPPPPPTTPGKVRPSEMSVSPRPVRELPNPQSMTPTPKATTQAEIPVPVAEVTRSGCSSEPCNVVEDADADAAKPRLKPLHWDKVRASSDRAMVWDQLKSGSFQLNENMIETLFGCNSKNPVQKESTRRSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVTEALLDGNPDGLGAELLETLVKMAPTKEEELKLRDYSGDISKLGSAERFLKAVLDIPFAFKRVDAMLYRANFDAEVKYLRTSFETLQAACEDLKNSRLFLKLLEAVLRTGNRMNVGTNRGDARAFKLDTLLKLVDVKGIDGKTTLLHFVVQEIIRSEGTGSDHTPENILNKMYPKVEDDFKVQGLQVVAGLSRELGNVKKAAGMDSDVLSSYVSKLEMGLEKVRLVLQYDKSNTQGKFFEAMKLFLNEAEEEILRVKADERKALSHVKEVTQYFHGDAAKEEAHPLRIFMVVRDFLSVLDQVCKEVGKMRDRTMVGAAKSFRIPASASLPVLNRFNIRQDGCSDEDNSCP* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01030 899 MobiDBLite consensus disorder prediction 348 367 - -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 240 312 - -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 43 102 - -
Eupl03g01030 899 Gene3D Formin, FH2 domain 448 860 IPR042201 -
Eupl03g01030 899 ProSiteProfiles Formin homology-2 (FH2) domain profile. 452 874 IPR015425 -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 313 332 - -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 240 426 - -
Eupl03g01030 899 SUPERFAMILY Formin homology 2 domain (FH2 domain) 382 861 - -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 46 74 - -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 171 226 - -
Eupl03g01030 899 PANTHER FORMIN-RELATED 355 887 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Eupl03g01030 899 Pfam Formin Homology 2 Domain 455 848 IPR015425 -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 376 396 - -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 79 102 - -
Eupl03g01030 899 SMART it6_source 452 863 IPR015425 -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 410 426 - -
Eupl03g01030 899 MobiDBLite consensus disorder prediction 171 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01030 Eupl-Chr3 33882396 33892596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01030 419 889 FH2 protein (formin) Gene Family AT5G67470 70.526 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01030 - - nnu:104608201 1098.57