Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01028 ATGGAAAAGACAGGGAGGGACTCTAAAAGGTCTTCTGCTCTGGTTACCAATATGGTTCCTCCAGAGGCACCTCCACTGCCTGGATTAGCGATGACACGTTATCATCGAAGGGGGTTAGTGGTGGATGGATTCCCGTTAAGGGGATATAGCTACGTTGCGACAGAGACGAAAGACTTGTGGGAACGCCTGTTTAATGAAGGTTATAGAGCAGATGTTATTATTAATACCGATAATGGCAGTGTCATCCATGCACACGCTAGCATTCTCGGCATGGCTTCTCCAGTGCTGAAGAGGACATTAAAGCAGTCGAGAAGCCGTGGCCATCGACGATCAATCTCCATTCGTGGTGTCCCACCTCAGGCAGTTCAAGTTTTCATTCGCTTCTTGTATTCTTCCTGCTATGAACAAGAAGAGATGAACGAATTTGTCTTGCCTTTGTTGGTGTTGTCGCATGTGTATGTGGTTCCCTCATTGAAGCGACAGTGTGAGCAGCAGCTGGAGAATGGTTTGCTCACCACAGAGAATGTGATTGACATCTTCCAGCTTGCACTACTCTGCGATGCACCCCGCCTTAGCCTCTTTTGTCATCGTTTGATCCTCAAGAGCTTTAAGGTCGTCTCTGCCACCGAAGGATGGAGAGCAATGAAGCAAAGCCACCCCATTCTGGAAAAAGAACTTAGAGAGTCCATGAAGGAAGCCAATTCAAGGAAACAAGATAGGCTGAGGAAAATTGAGGAGAGGAAGATATATTTACAACTATATGATGCAATGGAAGCCCTTGTTCACATATGTAGAGATGGATGTCGGACAATTGGCCCCCACGACAAGGTTTTGAAAGGGAACCAGGCACCTTGCAATTATGTGGCATGTAAGGGGCTCGAATTGCTTGTTCGTCACTTTGCTGGTTGCAAGATGAGAGTCCCTGGTGGTTGCATCCATTGCAAGAGAATGTGGCAGCTGCTGGAACTACATTCTCGCCTCTGTGAAGAATCCAATGAGTGTAGGGTTCCCTTATGCAGGAACTTTAAGGAGAGATTGAAGCAACAGAACAAGAAGGATGAGATCAAGTGGAAAATATTGGTAAGAAAAATTTTGAGAGCAAAGAACACTGCGGCACCATTCTTTTAA 1128 0.461 MEKTGRDSKRSSALVTNMVPPEAPPLPGLAMTRYHRRGLVVDGFPLRGYSYVATETKDLWERLFNEGYRADVIINTDNGSVIHAHASILGMASPVLKRTLKQSRSRGHRRSISIRGVPPQAVQVFIRFLYSSCYEQEEMNEFVLPLLVLSHVYVVPSLKRQCEQQLENGLLTTENVIDIFQLALLCDAPRLSLFCHRLILKSFKVVSATEGWRAMKQSHPILEKELRESMKEANSRKQDRLRKIEERKIYLQLYDAMEALVHICRDGCRTIGPHDKVLKGNQAPCNYVACKGLELLVRHFAGCKMRVPGGCIHCKRMWQLLELHSRLCEESNECRVPLCRNFKERLKQQNKKDEIKWKILVRKILRAKNTAAPFF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01028 375 ProSiteProfiles Zinc finger TAZ-type profile. 244 342 IPR000197 -
Eupl03g01028 375 SUPERFAMILY POZ domain 53 168 IPR011333 -
Eupl03g01028 375 Gene3D Potassium Channel Kv1.1; Chain A 52 171 IPR011333 -
Eupl03g01028 375 ProSiteProfiles BTB domain profile. 70 138 IPR000210 GO:0005515
Eupl03g01028 375 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 36 371 IPR044513 -
Eupl03g01028 375 Gene3D - 172 244 - -
Eupl03g01028 375 CDD BACK 172 215 - -
Eupl03g01028 375 Pfam TAZ zinc finger 255 339 IPR000197 -
Eupl03g01028 375 Coils Coil 227 247 - -
Eupl03g01028 375 SMART TAZ_2 247 340 IPR000197 -
Eupl03g01028 375 SUPERFAMILY TAZ domain 247 348 IPR035898 -
Eupl03g01028 375 SMART BTB_4 70 170 IPR000210 GO:0005515
Eupl03g01028 375 Gene3D TAZ domain 245 368 IPR035898 -
Eupl03g01028 375 FunFam BTB/POZ and TAZ domain-containing protein 2 172 242 - -
Eupl03g01028 375 FunFam BTB/POZ and TAZ domain-containing protein 2 244 369 - -
Eupl03g01028 375 Pfam BTB/POZ domain 62 168 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01028 Eupl-Chr3 33861388 33866855 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Eupl03g01028 BTB 3.2e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01028 - - psom:113288575 578.941