Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01026 ATGTATAGAGAAATGGAGGACTCTGAGTCTTCGTTTTCTCTCTCTAGTCTTCTTTGTCGAGAAAGCGAAGCTTGTTTTGATGAAGAGGTCGATGAAGACGTATTTATTAACTCAAACAATTATGCTCTCTCAGAAACCGAAGAAGATGAATATATCGAAATGTTGGTTGAAAGAGAGTGCCGATTCAAGAACAAAAGCCATAAATCTTCGGATGATTGTTTGACGATGACCGAAAACTGGTTCAAATGTGCTCGCTTTGATGCCATCAGATGGATTCTCAAAACAAGGGCGTATTTTGGGTTTAGCTTACAAACGGCTTATTTGTCCATGACTTACTTCGATCGCTTCTTATCGAAGCGAACCGTTGATAGTGAGAAATCTTGGGCGATTCGATTACTATCAGTGGCATGTTTATCTTTGGCTGCGAAGATGGAAGAATGTAGAGTCCCAGCCTTATCAGACTTTCGCACAGAAGAATACAACTTCGAAAGCAAGGTGATTCAAAGAATGGAGCTTCTGGTTTTGAACACGTTAGAATGGCGAATGGGTTCGATTACTCCCTTTGCTTATCTCCATTACTTCATCTCCAAATTTAGCAATGAACCTCGACCAAGAGATTTAGTATCGAGAGCTGTTGAACTTATGTTGGAATTAACAAAAGAGATGAAATTAACCAATCATCGACCGTCTGCTATAGCTGCGGCCGCAGTCTTAGCGGCATTGGATCGGAAATTGAACAGAAAATCAGTGGAGCTGAAGATGAGTGTGATCTCTTCATGTGGGTCTTTACAAAATGAGCATGTGTTTTCCTGCTATAATCTAATGCAGGAATTAGAGATGGGGAAATTCAAAATACCCAAGTTTGTAATTTCCCCAGATCTATCACCATTTCGCTCAAGCTCAACTGATGTTCTCGAGGATTCTTCCTTCACCTCTGCTCCTGGAACAAAGAGAAGAAGGATTACATTCAATGATAGTGATCAAAATTGTGAAATTTCAATTAAAGAAAACCCATCAACTCTTTGA 1026 0.3986 MYREMEDSESSFSLSSLLCRESEACFDEEVDEDVFINSNNYALSETEEDEYIEMLVERECRFKNKSHKSSDDCLTMTENWFKCARFDAIRWILKTRAYFGFSLQTAYLSMTYFDRFLSKRTVDSEKSWAIRLLSVACLSLAAKMEECRVPALSDFRTEEYNFESKVIQRMELLVLNTLEWRMGSITPFAYLHYFISKFSNEPRPRDLVSRAVELMLELTKEMKLTNHRPSAIAAAAVLAALDRKLNRKSVELKMSVISSCGSLQNEHVFSCYNLMQELEMGKFKIPKFVISPDLSPFRSSSTDVLEDSSFTSAPGTKRRRITFNDSDQNCEISIKENPSTL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01026 341 PANTHER CYCLINS 33 279 IPR039361 -
Eupl03g01026 341 SUPERFAMILY Cyclin-like 40 182 IPR036915 -
Eupl03g01026 341 SUPERFAMILY Cyclin-like 168 294 IPR036915 -
Eupl03g01026 341 Gene3D - 184 272 - -
Eupl03g01026 341 Gene3D - 76 183 - -
Eupl03g01026 341 SMART Cyclin_C_2 185 314 IPR004367 -
Eupl03g01026 341 SMART cyclin_7 193 277 IPR013763 -
Eupl03g01026 341 SMART cyclin_7 90 176 IPR013763 -
Eupl03g01026 341 FunFam Cyclin-D5-1 184 272 - -
Eupl03g01026 341 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Eupl03g01026 341 CDD CYCLIN_AtCycD-like_rpt2 185 275 - -
Eupl03g01026 341 CDD CYCLIN_AtCycD-like_rpt1 84 180 - -
Eupl03g01026 341 Pfam Cyclin, C-terminal domain 185 278 IPR004367 -
Eupl03g01026 341 MobiDBLite consensus disorder prediction 297 318 - -
Eupl03g01026 341 FunFam Cyclin-D5-1 80 183 - -
Eupl03g01026 341 Pfam Cyclin, N-terminal domain 52 182 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01026 Eupl-Chr3 33821574 33823840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01026 13 265 Core Cell Cycle Gene Families AT4G37630 38.889 4.27e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01026 K18811 - nnu:104590640 457.218