Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl03g01023 | ATGGAGAGCTATCTGGATGACAATATCGGAGGAGTGAAGCCGAAGAACTCGTCTTCGGAGGCACTTCAACGATGGAGGGATTTCTGTGGAAGAGTCGTCAAGAACCCCAAGCGAAGGTTCCGTTACACCGCCAATCTCTCCAAGCGAAACGAGGCAGCAGATATGCGTCGTAGCAATCAGGAGAAGTTGAGAGTTGCAGTTTTGGTATCGAAAGCTGCATTTCAGTTTATCCAAGGTGTATCGCTGAGCGACTACACTGTACCCGAGGAAGTCAGTGCTGCGGGATTTCAGATTTGTGCCGATGAGTTGGGATCCATTGTCGAAGGTCACGATGTAAAGAAGCTGGAAGCGCATGGTGGGGTAGATGGTATAGCTAACAAACTCTGCACATCAACCACCAACGGGCTTGCGGATTTATTGAGTGGCAGACAAGAAATTTATGGAATCAATAAATTCACTGAAAGCCAAGTGCGGAGTTTCTGGGTGTTTGTGTGGGAAGCCTTTCAAGATATGACTCTCATCATTCTTGCTGTGTGTGCCTTTGTGTCTCTGATTGTTGGGATAACCACAGAAGGATGGCCAAAGGGGGCCCATGACGGTCTTGGAATCGTTGCAAGCATCCTGTTGGTTGTGTTTGTCACTGCAATGAGCGATTATCGACAATCTCTACAGTTCAAGGATTTGGACAAGGAGAAGAAGAAGATCATCATTCAGGTTACAAGGAATGGGTACCGTCAGAAGATCTCAATATATGATCTACTTCCTGGTGATATTGTGCATCTTTCAATCGGAGACCAGGTCCCAGCAGATGGTTTGTTTGTCTCAGGATTCTCTGTATTGATAAATGAATCCAGTTTGACAGGAGAGTCTGACCCTGTGATGGTGAGTACTGAAAATCCTTTTCTGTTGTCTGGAACCAAAGTCCAAGATGGGTCATGCAAGATGCTGGTGACCACTGTTGGGATGAGAACCCAATGGGGTAAGTTGTTGGCTACCCTCAGTGAAGGAGGAGATGATGAAACTCCATTGCAGGTCAAACTGAATGGAGTGGCAACCATAATTGGGAAAATAGGCTTGTTCTTCGCTGTTGTGACCTTCGCAGTCTTGGTACAGGGAATGTTTAGCCGTAAGCTGCAAGAGGGGGCCCACTGGAGCTGGTCTGGAGACGATGCGTTGGAAATGTTGGAGTACTTTGCTGTTGCAGTTACAATCGTTGTGGTTGCAGTCCCAGAGGGGTTGCCTTTGGCTGTGACCTTGAGTCTTGCCTTTGCCATGAAAAAGATGATGAATGACAAGGCACTTGTTCGCCATCTTGCGGCTTGTGAGACTATGGGGTCTGCCACGAGCATCTGCAGTGACAAGACTGGGACACTGACTACCAACCACATGACCGTTGTTAAAGCATGCATTTGTGGGAATATCAAGGAAGTGAACAGCTCCAAGGATGCTCTTAGTTTGTGCTCTGAAATCCCTGATGTTGCTGTGAAAATCCTCCTCCAATCGATATTTAATAACACGGGGGGAGAAGTTGTGGTTAACAAAGATGGAAAATCTGAGATTTTAGGAACACCAACCGAGACTGCCCTGTTGGAGTTTGGCTTGTCACTTGGTGGAGAGTTTCAGGCAGAGCGCCAAGCATCCAAACTTATAAAAGTTGAACCATTTAATTCTGAGAAGAAAAGAATGGGGGTAGTGCTAGAGCTTCCTGAAGGAGGTTTCCGGGCTCACTGTAAAGGTGCTTCAGAAATAATTTTGGATGCATGTGACAAGGTTATAGATCCAAATGGCGTCGTTGTTGCTCTTGATGAAGCATCTATCAACCACCTCAAGGATACAATTGAACAGTTTGCTAATGAAGCTCTTCGAACTCTATGCCTTGCTTATATAGAAATGGGAAATGAATTCTCTGCCAAGGAACCTATTCCAGTTTCAGGATATACTTGTATAGGAATTGTAGGTATCAAAGATCCTGTCCGCCCTGGCGTCAAGGAATCTGTGTCAATTTGTAGGTCAGCTGGGATTACTGTAAGAATGGTTACAGGAGACAACATAAACACCGCAAAGGCAATTGCTAGGGAATGTGGCATTCTGACTGATGAGGGTATAGCCATTGAAGGTCCAGTGTTTCGGGAGAAGAGTTCGGAGGAATTGCAAGTACTGATTCCCAAAATTCAGGTGATGGCTCGATCTTCACCATTAGATAAGCATACCTTGGTGAAACACTTGAGAACCACTTTAGGTGAAGTTGTTGCGGTGACTGGCGATGGTACAAATGATGCTCCAGCACTTCATGAAGCAGATATTGGACTGGCAATGGGCATTGCTGGAACTGAGGTGGCAAAAGAGAGTGCTGATGTCATAATCTTAGATGACAATTTCTCCACTATCGTGACCGTGGCCAAATGGGGACGTTCAGTTTACATTAACATACAAAAATTTGTACAGTTTCAACTGACTGTTAACGTGGTTGCCCTCATTGTTAATTTTTCTTCAGCATGCTTGACTGGAAAAGCCCCCCTGACAGCTGTTCAGCTTCTGTGGGTCAACATGATCATGGATACACTGGGAGCACTTGCACTAGCCACTGAGCCTCCTAATGACGAATTAATGAAAAGAATGCCTGTTGGAAGGAAAGGGAATTTTATCAGCAACGTGATGTGGAGGAATATCTTGGGGCAATCTATTTATCAGTTTGTGGTAATATGGTATCTCCAGCGTGAAGGAAAAGTGATATTCCATCTAGATGGCCCTGAATCTGATCTGATTCTGAATACACTAATTTTTAACTCATTCGTCTTTTGTCAGGTTTTTAATGAGATAAGCTCTAGAGAGATGGAGAAGATAGATGTTTTCCAAGGCATACTGAAGAACTATGTGTTTGTGGTTGTGCTCACTTGCACTGTTCTCTTTCAAATCATAATTATTGAGTTTCTTGGTACATTTGCAAACACCTCCCCACTCACGTTACCGCAGTGGTTCCTGAGTGTCTTCATTGGATTCTTAGGCATGCCTATCGCTGCTGCCATCAAGATGATACCTGTGGGATCTAAATGA | 3054 | 0.4483 | MESYLDDNIGGVKPKNSSSEALQRWRDFCGRVVKNPKRRFRYTANLSKRNEAADMRRSNQEKLRVAVLVSKAAFQFIQGVSLSDYTVPEEVSAAGFQICADELGSIVEGHDVKKLEAHGGVDGIANKLCTSTTNGLADLLSGRQEIYGINKFTESQVRSFWVFVWEAFQDMTLIILAVCAFVSLIVGITTEGWPKGAHDGLGIVASILLVVFVTAMSDYRQSLQFKDLDKEKKKIIIQVTRNGYRQKISIYDLLPGDIVHLSIGDQVPADGLFVSGFSVLINESSLTGESDPVMVSTENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLLATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGMFSRKLQEGAHWSWSGDDALEMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKACICGNIKEVNSSKDALSLCSEIPDVAVKILLQSIFNNTGGEVVVNKDGKSEILGTPTETALLEFGLSLGGEFQAERQASKLIKVEPFNSEKKRMGVVLELPEGGFRAHCKGASEIILDACDKVIDPNGVVVALDEASINHLKDTIEQFANEALRTLCLAYIEMGNEFSAKEPIPVSGYTCIGIVGIKDPVRPGVKESVSICRSAGITVRMVTGDNINTAKAIARECGILTDEGIAIEGPVFREKSSEELQVLIPKIQVMARSSPLDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGKAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRMPVGRKGNFISNVMWRNILGQSIYQFVVIWYLQREGKVIFHLDGPESDLILNTLIFNSFVFCQVFNEISSREMEKIDVFQGILKNYVFVVVLTCTVLFQIIIIEFLGTFANTSPLTLPQWFLSVFIGFLGMPIAAAIKMIPVGSK* | 1018 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl03g01023 | 1017 | PANTHER | CATION TRANSPORTING ATPASE | 60 | 1014 | - | - | |
| Eupl03g01023 | 1017 | SUPERFAMILY | Calcium ATPase, transduction domain A | 236 | 331 | IPR008250 | - | |
| Eupl03g01023 | 1017 | Pfam | haloacid dehalogenase-like hydrolase | 649 | 767 | - | - | |
| Eupl03g01023 | 1017 | SFLD | C1.7: P-type atpase like | 433 | 805 | - | - | |
| Eupl03g01023 | 1017 | Pfam | Cation transporting ATPase, C-terminus | 838 | 1012 | IPR006068 | - | |
| Eupl03g01023 | 1017 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 111 | 1014 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Eupl03g01023 | 1017 | Gene3D | - | 142 | 334 | - | - | |
| Eupl03g01023 | 1017 | SMART | Cation_ATPase_N_a_2 | 117 | 188 | IPR004014 | - | |
| Eupl03g01023 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 451 | 465 | - | - | |
| Eupl03g01023 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 672 | 682 | - | - | |
| Eupl03g01023 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 650 | 661 | - | - | |
| Eupl03g01023 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 753 | 772 | - | - | |
| Eupl03g01023 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 282 | 296 | - | - | |
| Eupl03g01023 | 1017 | PRINTS | P-type cation-transporting ATPase superfamily signature | 777 | 789 | - | - | |
| Eupl03g01023 | 1017 | NCBIfam | HAD-IC family P-type ATPase | 203 | 373 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl03g01023 | 1017 | NCBIfam | HAD-IC family P-type ATPase | 724 | 834 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl03g01023 | 1017 | NCBIfam | HAD-IC family P-type ATPase | 544 | 698 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl03g01023 | 1017 | NCBIfam | HAD-IC family P-type ATPase | 391 | 480 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl03g01023 | 1017 | Gene3D | - | 448 | 798 | IPR023214 | - | |
| Eupl03g01023 | 1017 | Gene3D | - | 17 | 78 | - | - | |
| Eupl03g01023 | 1017 | SFLD | p-type atpase | 433 | 805 | IPR044492 | - | |
| Eupl03g01023 | 1017 | PRINTS | H+-transporting ATPase (proton pump) signature | 609 | 627 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl03g01023 | 1017 | PRINTS | H+-transporting ATPase (proton pump) signature | 753 | 769 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl03g01023 | 1017 | PRINTS | H+-transporting ATPase (proton pump) signature | 785 | 810 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Eupl03g01023 | 1017 | FunFam | Calcium-transporting ATPase | 166 | 223 | - | - | |
| Eupl03g01023 | 1017 | FunFam | Calcium-transporting ATPase | 646 | 798 | - | - | |
| Eupl03g01023 | 1017 | Gene3D | - | 166 | 1011 | - | - | |
| Eupl03g01023 | 1017 | FunFam | Calcium-transporting ATPase | 770 | 1016 | - | - | |
| Eupl03g01023 | 1017 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 453 | 459 | IPR018303 | - | |
| Eupl03g01023 | 1017 | Pfam | Cation transport ATPase (P-type) | 514 | 591 | - | - | |
| Eupl03g01023 | 1017 | Pfam | Cation transporter/ATPase, N-terminus | 117 | 183 | IPR004014 | - | |
| Eupl03g01023 | 1017 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 118 | 1013 | IPR023298 | - | |
| Eupl03g01023 | 1017 | FunFam | Calcium-transporting ATPase | 213 | 334 | - | - | |
| Eupl03g01023 | 1017 | CDD | P-type_ATPase_Ca_PMCA-like | 140 | 886 | - | - | |
| Eupl03g01023 | 1017 | Pfam | E1-E2 ATPase | 236 | 429 | - | - | |
| Eupl03g01023 | 1017 | Gene3D | - | 461 | 657 | IPR023299 | GO:0000166 | |
| Eupl03g01023 | 1017 | FunFam | Calcium-transporting ATPase | 17 | 78 | - | - | |
| Eupl03g01023 | 1017 | SUPERFAMILY | HAD-like | 450 | 858 | IPR036412 | - | |
| Eupl03g01023 | 1017 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 457 | 662 | IPR023299 | GO:0000166 | |
| Eupl03g01023 | 1017 | FunFam | Calcium-transporting ATPase | 461 | 657 | - | - | |
| Eupl03g01023 | 1017 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 6 | 51 | IPR024750 | GO:0005516 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Eupl03g01023 | Eupl-Chr3 | 33783906 | 33794062 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Eupl03g01023 | 1 | 1014 | Primary Pumps ATPases | AT4G37640 | 81.532 | 0.0 | 1690 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl03g01023 | K01537 | - | ming:122083958 | 1718.75 |