Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01021 ATGGAGACGGGGATTCCGGCGAGCTACACCTACATAAGACGGAGCTTCGGCGACCTGAGCAACGTCGATAATTCGTCCTCGGCCTTCAGCGACTGCAACAGCGATAGATCTGGAGAGTTCTCGACGGCTTCTTCGCAGAGCCGATGTCTCCTGATTGCTTGTGCTTCTGAGAATTCCGACGATTTGATCCGACAGCTTGTCTCCGATCTCGAGTCCTGTTCGATTGACGTACAGAAACAAGCGGCCATGGAGATTCGCCTCCTCGCGAAGAACAAGCCAGAAAATCGCCTCAAGATCGCCAGACAGGGTGCTGTAAGACCTCTTGTTTCTCTCATTTCCTCTTCAGATTCTCAGCTTCAAGAGTACGGCGTTACAGCAATTTTAAACCTCTCTTTATGCGACGAAAACAAGGATTTGATCGCCAACTCGGGAGCGATTAAACCGCTCGTGAGAGCTCTCAAGAACGGAACAGCGACGGCGAAGGAGAACGCTGCGTGTGCTCTGCTGCGCCTCTCTCAGGTCGAGGAGAACAAGATGGCGATCGGACGCTCAGGAGCGATTCCGCTTCTGGTAAACTTATTGGAGAGCGGTGGTTTTCGCGGGAAAAAAGACGCATCAACGGCGCTTTATTTGCTCTGTTCGGTGAACGAGAATAAAATCAGAGCCGTTCAAGCCGGGATCATGAAACCATTAGTGGAATTAATGGCGGATTTCGAGGCTGGTATGGTGGATAAAGCGGCTTTCGTCTTAAATATCCTTGTCTCGATTCCGGAGGGGAGAACCGCTGTAGTTGAGGAAGGCGGTATTCCGGTACTGGTCGAGATTGTGGAGGTCGGATCACAGCGGCAGAAAGAGATCGCAGCCGCAATTTTATTGCAGATCTGCGAGGATAGCTTGGCGTGTCGGACTATGGTAGCCCGCGAAGGAGCGTTACCACCGTTGGTCGCTTTGTCACAGTCCGGCACGACTGTGGCTAAACAGAAGGCAGAGGCACTCATTGATCTTCTGAGGAAACCGAGATCTGGCAGCAATGCAGCCTAG 1041 0.5216 METGIPASYTYIRRSFGDLSNVDNSSSAFSDCNSDRSGEFSTASSQSRCLLIACASENSDDLIRQLVSDLESCSIDVQKQAAMEIRLLAKNKPENRLKIARQGAVRPLVSLISSSDSQLQEYGVTAILNLSLCDENKDLIANSGAIKPLVRALKNGTATAKENAACALLRLSQVEENKMAIGRSGAIPLLVNLLESGGFRGKKDASTALYLLCSVNENKIRAVQAGIMKPLVELMADFEAGMVDKAAFVLNILVSIPEGRTAVVEEGGIPVLVEIVEVGSQRQKEIAAAILLQICEDSLACRTMVAREGALPPLVALSQSGTTVAKQKAEALIDLLRKPRSGSNAA* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01021 346 Gene3D - 28 199 IPR011989 -
Eupl03g01021 346 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Eupl03g01021 346 SUPERFAMILY ARM repeat 56 329 IPR016024 -
Eupl03g01021 346 FunFam RING-type E3 ubiquitin transferase 52 342 - -
Eupl03g01021 346 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 144 186 IPR000225 GO:0005515
Eupl03g01021 346 Gene3D - 201 339 IPR011989 -
Eupl03g01021 346 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Eupl03g01021 346 Pfam Armadillo/beta-catenin-like repeat 134 172 IPR000225 GO:0005515
Eupl03g01021 346 Pfam Armadillo/beta-catenin-like repeat 176 214 IPR000225 GO:0005515
Eupl03g01021 346 PANTHER U BOX DOMAIN-CONTAINING 62 338 - -
Eupl03g01021 346 SMART arm_5 215 255 IPR000225 GO:0005515
Eupl03g01021 346 SMART arm_5 133 173 IPR000225 GO:0005515
Eupl03g01021 346 SMART arm_5 256 296 IPR000225 GO:0005515
Eupl03g01021 346 SMART arm_5 297 337 IPR000225 GO:0005515
Eupl03g01021 346 SMART arm_5 174 214 IPR000225 GO:0005515
Eupl03g01021 346 SMART arm_5 92 132 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01021 Eupl-Chr3 33734470 33736724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01021 63 343 U-box Gene Family AT2G23140 54.448 1.68e-90 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01021 - - csin:114301779 548.51