Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01007 ATGGGGAAGAAACAGCACAGTAAAGATCGGATGTTCATAACGAAGACTGAGTGGGCGACCGAATGGGGCGGTGCCAAATCCAAAGAAGTCGGTACGCCATTCAAGCGTCTCCCCTTCTATTGCTGCGCGCTCACATTTACTCCGTTTGAGGATGCAGCGTGCACGATCGATGGCAGCGTTTTCGATTTGATGAGTATAACCCCGTACATCAAGAAATATGGAAAACATCCTGTTACCGGAGCTCCCCTCAAGCAAGAGGATCTCATCCCACTTACCTTTCACAAGAACTCTGAAGGAGAATACAATTGCCCGGTTCTGAACAAAGTCTTTACGGAATTTACACATATAGTAGCGGTGAAAACTACAGGGAATGTGTTCTGTTATGAGGCAATTAAAGAACTGAACCTGAAAACTAAAAACTGGAAGGAACTCCTCACAGATGAACCATTCACCAGGGAAGACCTGATAACAATTCAGAATCCAAATGCACTTGATAGCAAAGTCCTTGTGGAGTTTGATCACATTAAAAACAGTTTGAAACTTGATGATGAAGAATTAAGGAGAATGGGTTCAGATCCAACCTATAACATAAACGTATCTGGGGATATTAAGCAAATGCTGCAGGAGCTTGGAACTGAGAAGGGGAGGGAAACTGCATTGCATGGCGGAGGTGGTAGCAAAGCACAAAATGAAAGAGCTGCAGCCCTTGCTACCATTTTATCCGCAAGGTCTCGTATTAAAGAGGATTCCAAATCAAGCACAAATGGAGAGGTTAAAGCCACTCAGTCATACAGTATTGTAGATGCTGCATCTGCTTCGGTACATGGAAGAAGCGCGGCGGCAGCCAAAGCTGCGTCAAATGATAAGACTGCTGCTCGCATAGCTATGCACATGGCAGGGGAACGCGCCCCTGTGAATGCAAAAATGGTAAAAAGTCGTTTCACTACTGGCGCTGCTTCGCGATCCTTCACCTCTACCTCTTATGATCCCGTTACCAAAAATGAATTTGAATATGTCAAAGTAGAGAAAAATCCCAAGAAAAAAGGCTACATTCAGTTGCATACGACACATGGTGATTTGAACATAGAGCTGCACTGTGACATAACTCCCAGGACATGCGAAAACTTCATCACGCTCTGTGAACGTGGCTACTATAATGGAATAGCTTTCCATCGAAACATTAGGAATTTCATGATTCAAGGTGGCGACCCCACTGGCACTGGAAGAGGGGGCGAGTCTATTTGGGGAAAGCCTTTCAAAGATGAACTTAACTCAAAATTACTTCACTCAGGGAGGGGCATCGTCAGTATGGCAAATAGTGGTCCCCATACAAATGGTTCCCAGTTTTTCATCATGTACAAGTCTGCAAAACATCTGGACTTCAAACATACTGTTTTTGGTGGAGTTGTAGGTGGTTTGACTACCCTTGCAGTGATGGAAAAGGTTCCTGTTGATGATGATGACCGACCTTTGGAAGAAATAAAGATAACAAGTGTCACGGTATTTGTCAATCCATACACAGAACCGGAGGAAGAAGAGGAAGAGAAGAACAAAGATGAGAAGAATACCGGTAATGAGGAGAATGATAAGGTGGGTTCGTGGTATAGCAATCCAGGCATAGGAACGACGGAATCTATAGCTGTGGGTGGTGGAGTAGGCAAGTATCTGAAAGCAAAAACCACCAAAACTGAAGGTGCTGCTGCTGACACTGCTCCAGAAGCGAAAGGCGTAGCCAAGAAAAGGAAATTAGGTGCTTCAACAGTGGAATATAAGAACTTCTCTGGCTGGTAA 1791 0.4444 MGKKQHSKDRMFITKTEWATEWGGAKSKEVGTPFKRLPFYCCALTFTPFEDAACTIDGSVFDLMSITPYIKKYGKHPVTGAPLKQEDLIPLTFHKNSEGEYNCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNLKTKNWKELLTDEPFTREDLITIQNPNALDSKVLVEFDHIKNSLKLDDEELRRMGSDPTYNINVSGDIKQMLQELGTEKGRETALHGGGGSKAQNERAAALATILSARSRIKEDSKSSTNGEVKATQSYSIVDAASASVHGRSAAAAKAASNDKTAARIAMHMAGERAPVNAKMVKSRFTTGAASRSFTSTSYDPVTKNEFEYVKVEKNPKKKGYIQLHTTHGDLNIELHCDITPRTCENFITLCERGYYNGIAFHRNIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLLHSGRGIVSMANSGPHTNGSQFFIMYKSAKHLDFKHTVFGGVVGGLTTLAVMEKVPVDDDDRPLEEIKITSVTVFVNPYTEPEEEEEEKNKDEKNTGNEENDKVGSWYSNPGIGTTESIAVGGGVGKYLKAKTTKTEGAAADTAPEAKGVAKKRKLGASTVEYKNFSGW* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01007 596 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 331 515 - -
Eupl03g01007 596 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 354 501 IPR002130 GO:0000413|GO:0003755
Eupl03g01007 596 Gene3D - 330 515 IPR029000 -
Eupl03g01007 596 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 350 501 IPR002130 GO:0000413|GO:0003755
Eupl03g01007 596 CDD cyclophilin_RING 350 507 - -
Eupl03g01007 596 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Eupl03g01007 596 SUPERFAMILY Cyclophilin-like 350 515 IPR029000 -
Eupl03g01007 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 364 379 IPR002130 GO:0000413|GO:0003755
Eupl03g01007 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 461 476 IPR002130 GO:0000413|GO:0003755
Eupl03g01007 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 IPR002130 GO:0000413|GO:0003755
Eupl03g01007 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 402 IPR002130 GO:0000413|GO:0003755
Eupl03g01007 596 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 448 460 IPR002130 GO:0000413|GO:0003755
Eupl03g01007 596 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Eupl03g01007 596 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
Eupl03g01007 596 MobiDBLite consensus disorder prediction 504 537 - -
Eupl03g01007 596 SUPERFAMILY RING/U-box 37 104 - -
Eupl03g01007 596 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 345 515 IPR044666 -
Eupl03g01007 596 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Eupl03g01007 596 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01007 Eupl-Chr3 33500388 33515747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01007 1 596 U-box Gene Family AT5G67530 75.500 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01007 K10598 - mof:131162689 1011.91