Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01006 ATGGATACCTTGTTTAGACTAGTTAGTCTTCAATCTGACCAGTCCTACAATTCAAGTAGAACCTCTACCAGCTCTAGATCTTCTAAACAAAACCATCATCACCACCACCAACAAGAAGAAGAAGAAGAAGAATGCGGCAACTTTTTCATGGATGAAGACGACTTCTCTTCTTCTTCTTCTAAACATTTCTTCTCTTATCACCCTTCCCCCACCACCACCCCCACCGCTACTACTAACACTACAACCACCCCCACCGAATTCTCCTTCTCCCAAGCTCCTGACCTCAACCTCGAATTCGCTTCATCCACATCCGGTAAGTGGGCATCCGACATCCTTATTGAAACGGCACGTGCGATTGCCGATAAGAACAGCGCACGTGTCCAACAACTCATGTGGATGCTCAATGAACTTAGCTCTCCTTATGGCGATACCGATCAGAAGCTCGCTTCATACTTCCTTCAGGCTTTGTTTTCTCGCATAACTGACTCTGGTGAGCGATGCTATCGGACTTTAACAGCTGCATCAGAGAAGACATGCTCGTTCGAATCGACAAGGAAGATGGTCTTGAAATTCCAAGAGGTAAGCCCATGGACTACTTTTGGTCATGTAGCTTCCAATGGTGCAATTTTGGAGGCTTTTGAAGGGGAAAGCAAGTTACATATAGTAGATATTAGCAACACGTATTGCACCCAATGGCCTACTTTGCTTGAAGCCTTGGCGACGCGTACTGATGAAACACCGCATCTCCGTCTAACTACCGTGGTGGTCAACAAGGGCGTAGCTGGAGCTGGAACTGGTGGTGTTGCAGCGGTGCAAAAGGTCATGAAAGAGATCGGAAATCGGATGGAGAAGTTCGCGCGTCTCATGGGTGTACCGTTTAAATTCAATGTAGTGCACCATGCTGGTGATTTGTCTGACTTGAACTTGGCTGAATTGGATATTAGAGATGATGAAGCACTTGCTGTCAACTGTATCGGAACGTTACATTCAGTCTCAGCGGTTGGTAATCGTCGTGATGTTGTCGTGTCGGCGTTTAGGAGGTTACAGCCGAAGATCGTAACGGTTGTTGAAGATGAAGCTGACTTGGATGTTGGGGTTGATGGGTTTGACTTTGTCAAAGGTTTTCAAGAGTGTTTGAGGTGGTTCAGGCTTTACTTTGAGTCGTTTGATGAGAGCTTCTCGCGTACGAGTAACGAACGATTGATGCTCGAGCGAGCAGCTGGGCGAGCGCTCGTTGACTTAGTAGCGTGTCCACCTTCAGAGTCTGTGGAGCGGAGAGAATCGGCTGCGCGTTGGTCACATCGTGTACTCGCAGCCGGGTTTAGCCCTGTTGGGTATAGCGATGATGTGTCTGATGACGTGCGTGCGCTCCTACGCCGGTACAAGGAAGGATGGTCGATGACACAAGGCTCCGACGCTGGAATTTTCTTGGCGTGGAAGGATCAGCCTGTCGTGTGGGCTTCTGCGTGGAAGCCTTGA 1479 0.4855 MDTLFRLVSLQSDQSYNSSRTSTSSRSSKQNHHHHHQQEEEEEECGNFFMDEDDFSSSSSKHFFSYHPSPTTTPTATTNTTTTPTEFSFSQAPDLNLEFASSTSGKWASDILIETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRITDSGERCYRTLTAASEKTCSFESTRKMVLKFQEVSPWTTFGHVASNGAILEAFEGESKLHIVDISNTYCTQWPTLLEALATRTDETPHLRLTTVVVNKGVAGAGTGGVAAVQKVMKEIGNRMEKFARLMGVPFKFNVVHHAGDLSDLNLAELDIRDDEALAVNCIGTLHSVSAVGNRRDVVVSAFRRLQPKIVTVVEDEADLDVGVDGFDFVKGFQECLRWFRLYFESFDESFSRTSNERLMLERAAGRALVDLVACPPSESVERRESAARWSHRVLAAGFSPVGYSDDVSDDVRALLRRYKEGWSMTQGSDAGIFLAWKDQPVVWASAWKP* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01006 492 ProSiteProfiles GRAS family profile. 99 491 IPR005202 -
Eupl03g01006 492 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 484 IPR005202 -
Eupl03g01006 492 Pfam GRAS domain family 110 491 IPR005202 -
Eupl03g01006 492 MobiDBLite consensus disorder prediction 15 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01006 Eupl-Chr3 33493725 33496173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01006 1 492 GRAS Transcription Factor Family AT4G37650 60.668 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl03g01006 GRAS 2.4e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01006 - - nnu:104608404 747.273