Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g01001 ATGTTGTGCGCTTGCTCGGGAGAGCAATTCAAATTCGATGAGGTGCCTCAGTCGCCGGAATCTCTGGCCACAAGAGATTTCTCAGCCAGTGGTCTCTCATCAAGGACCGGGGATTGGGAATCGAGGTTTGAAGAGAGCCAGGTCGATGATGTTGAATCGACTCTAAAGGAAGCTCTCTCTTTGAACTATGAGGAAGCCAGGGCTTTACTGGGACGACTGGAATATCAGAGAGGAAACTTTGATGCTGCACTTCAGGTGTTTCAGGGGATCAACATTCGTGGTTTAACTCCAAGAATGACCAAAGCTATTGTCGACAGAACTCGACAAAGGAAAGGGCGTCCCAAAGCTGAGAACTTGCAGACGGGTGTATTGTCGATGCATTCCGTAAGCCTGCTTCTTGAAGCAATCTTACTTAAAGCAAAATCATTGGAGGCTCTTGGGTGCACTGAAGAGGCTGCAAAGGAATGTAAAATTATTCTGGAGACAGTCGAATCAGCCCTGCCCAATGGAATGCCTGAGGGTTTTGCTGAAGATTGCAAGTTGCAGGAGATGTTTCACAAAGCATTAGAGTTGCTTCCCAAGCTGTGGAAACAAGCTGGCTTTCTTGATGAAGCTATTGTTGCATATCGTCGGGCTCTAACCAAGCCCTGGAATTTGGACCCCCAAAAGCTGGCTAGCATCCAGAAAGACTTAGCCGCAATCCTACTTCATGGAGGTGTTGAAGCAAGCCTCCCGCCTCAATTGCAAATATGGGGCTCAACTACCCCTAGGAATAATACCGAGGAAGCGATCCTGCTGTTGTTTATACTCTTGAGGAAGGTGGCGTTTCAGGAAATAGTTTGGGATCCTGAAATCATGGACCAACTCACCTTCGCACTCTCAGTATCTGGGCAATTTGAATTTTTGGCAGATCATGTCGAACAGGTCCTTCCAGGTATCTACAACCGAGCCGAAAGGTGGTACCTTCTGGCTCTTTGTTACAGTGCTGCAGGTCAGGATGAGGTGGCCTTGAACCTTCTAAAGAAGGTTTTGGGTCGGTCCGAATCGAAGCATGAACCCCATCTCCCTTCACTTCTGTTGGGAGCAAAGTTATGTTCTCAGAATCCAAAGCATGCTAGTGAAGGGATAGATTTTGCTCAGAGAGCTATTGACTTAACAAATCATCAAAATGAGCATTTTATGGGTCGAGCTCGTCAGTTGCTTGGTGTTTGTTCTGGAAGTGCTGCTAGAGTTTCTGTCTTGGATTCTCAAAGGGTTCTCCTTCAGAGTGAGTCCTTGAAATACCTAAACCAAGCTGCCATGATGGAGAGAGACGACCCAGAATTACTGTTTAGCCTTGGGCTGGAGAATGCTGTGCAACGGAACTTAAATGCAGCTTTGGAAAACACAAGAATGTATTCAGATACGGTCGGTGGAAGCTCAAGACAAGGTTGGAAGTTATTATCTCTGGTAGTATCTGCAGAGCAACGGTTCAAAGATGCCGAAACCATAGTTGATCTTGCTTTGGATGAGGCTGGAAGAAGGGATCAATTAGAACTTCTGAGGTTGAAAGCTGTGCTTCAAATCGCTCAGGAACAACCCAAGCACGCAATAGAGACCTATAGAGTTTTGCTTGCATTGATTCAAGCACAAAGGGAGCTTCAAACTAAGAACTCTGACTCCGAGGTACTAGCAGATACGAATTTAGAAATTGAAGCCTGGCAGGACTTGGCAAACATTTACACAAAACTTGGATCATGGCCTGATGCAGAAATTTGTGCAGAGAAAGCCAAGTCGATCAGATTTTATTCTCCTAAAAGTTGGCACACAACAGGGATGTTATTTGAAGCTCAGACATTATACAAAGAAGCGCTTGTGGCCTTCTCGATCTCACTGTCGATCGAACCAGATTATGTCCCAAGCATGGTTTCAACAGCAGCAGTACTGAGAAAGCTTGGCAAGGAATCCCTCCCAATTGCAAGAAGCTTCTTAATGAACGCTCTACGTTTAGAACCCACAAATCATGAGGCATGGTTAAACCTGGGATTTGTTTCAAAGATGGAAGGCTCTCTACAGCAAGCTGCAGACTTTTTCCAAGCAGCATATGAGCTCAAGCAATCAGCTCCTGTTCAGAACTTTGTCTGA 2124 0.4572 MLCACSGEQFKFDEVPQSPESLATRDFSASGLSSRTGDWESRFEESQVDDVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGINIRGLTPRMTKAIVDRTRQRKGRPKAENLQTGVLSMHSVSLLLEAILLKAKSLEALGCTEEAAKECKIILETVESALPNGMPEGFAEDCKLQEMFHKALELLPKLWKQAGFLDEAIVAYRRALTKPWNLDPQKLASIQKDLAAILLHGGVEASLPPQLQIWGSTTPRNNTEEAILLLFILLRKVAFQEIVWDPEIMDQLTFALSVSGQFEFLADHVEQVLPGIYNRAERWYLLALCYSAAGQDEVALNLLKKVLGRSESKHEPHLPSLLLGAKLCSQNPKHASEGIDFAQRAIDLTNHQNEHFMGRARQLLGVCSGSAARVSVLDSQRVLLQSESLKYLNQAAMMERDDPELLFSLGLENAVQRNLNAALENTRMYSDTVGGSSRQGWKLLSLVVSAEQRFKDAETIVDLALDEAGRRDQLELLRLKAVLQIAQEQPKHAIETYRVLLALIQAQRELQTKNSDSEVLADTNLEIEAWQDLANIYTKLGSWPDAEICAEKAKSIRFYSPKSWHTTGMLFEAQTLYKEALVAFSISLSIEPDYVPSMVSTAAVLRKLGKESLPIARSFLMNALRLEPTNHEAWLNLGFVSKMEGSLQQAADFFQAAYELKQSAPVQNFV* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g01001 707 SUPERFAMILY TPR-like 511 700 IPR011990 GO:0005515
Eupl03g01001 707 SMART tpr_5 668 701 IPR019734 GO:0005515
Eupl03g01001 707 SMART tpr_5 317 350 IPR019734 GO:0005515
Eupl03g01001 707 SMART tpr_5 564 597 IPR019734 GO:0005515
Eupl03g01001 707 SMART tpr_5 598 631 IPR019734 GO:0005515
Eupl03g01001 707 SMART tpr_5 133 166 IPR019734 GO:0005515
Eupl03g01001 707 ProSiteProfiles TPR repeat profile. 598 631 IPR019734 GO:0005515
Eupl03g01001 707 ProSiteProfiles TPR repeat profile. 668 701 IPR019734 GO:0005515
Eupl03g01001 707 Gene3D Tetratricopeptide repeat domain 651 705 IPR011990 GO:0005515
Eupl03g01001 707 Gene3D Tetratricopeptide repeat domain 478 650 IPR011990 GO:0005515
Eupl03g01001 707 SUPERFAMILY TPR-like 315 461 IPR011990 GO:0005515
Eupl03g01001 707 Gene3D Tetratricopeptide repeat domain 257 469 IPR011990 GO:0005515
Eupl03g01001 707 Gene3D Tetratricopeptide repeat domain 35 242 IPR011990 GO:0005515
Eupl03g01001 707 Coils Coil 56 76 - -
Eupl03g01001 707 PANTHER PROTEIN NPG1 1 706 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g01001 Eupl-Chr3 33412967 33417946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g01001 1 707 Calmodulin-binding Proteins AT1G27460 61.463 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g01001 K21843 - ming:122085138 1137.09