Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00992 ATGGACAATCTTCTAACTCAGTCTACCTTCCTTTCTCTACTTCTTCTCCACCTCTCATTTCTTCTGCTTATCTCATTAGCTTACGCTCAAGATCCATATTTTATCAACTGCGGATCAGACACTAGCATTCCCGTCGACGTTCGGACGACTTTTGTTGGAGACTCGGGGCACAGCTCTTTCACCTTGTCTGCAACTCCAGATATCAGTGTCAAAGATCAAAGTACATCTCAGAGTTCATCACCTGAACTCTATCAGACTGCGAGAATTTTCAAAAGGCCCTCCTCCTACGAGTTCAATATCAACAGCACGGGTGCTACTCTTCTGGTACGGTTCCATTTCTTTCCTTTCTCCACACCAGCGTATGATCTTGCCTCTGCTGTCTTCGATGTTTCGGTTACTGGGTTTTCTCTGTTAAAAAATTTTAGTGTCCGAAGAAGCAATGACTTACCCATGCTGAAGGAGTATTTATTTAGTAACAATAGTGGGAAATTCACTATATATTTCATGCCTTCCCAAAATTCCTTCGCCTTCATTAATGCCATAGAAGTCTTCTCTGCTGGTGAAAATCTCATCCAGGATAAATTCATTTCTCTTGCGAAAGGAGATGTTAATAAGAGTCTGTTATCCCAGTTTTTACTGAAAGTCCACAGGATCAACGTTGGAGGTCCAGATATCACACCTCATATTGATTCTCTGCGGAGAAGTTGGATTCCTGACGAGAGGTATCTGCATGTGAAGGAGGCTGCAGAACCCAAGTCTATTACTGAACAGCTACAAGACCGTGAACGAGTGAGTCAAAAAATTGCTCCTGACCATGTTTACCAGAGTTGCCAAGAAATGAATAAACACTACCATACTGCATCAAATATTTTCAACCTTACATGGATCTTTAATGTCCGTTCAGGTGTCAATCATTTGGTCCGGATGCACTTCTGTGACATAGTCAGTGATGAGATGGAAAATTTATACGTCAAAGTCTATATTGATCGCTATGATGGACACGAAATTTATATCTCAGCAGAAACGTATAACATTCCGAGAGCCCCTTACTACATCGATTTTGTTGCTAAATCCCAGGATTCAGGCAACATGACTATTAGTGTAGGGCCTATACTTTCTTTGGACAAGGGCGGCAATGCTATTCTGAATGGGCTGGAGATCATGGAGATCGGGAACGATACTGAGAGTCTGATTTCTTTGCAAAACAAGTCCAAGAAAAACCATGTTTTTGTTCTCGTTGGTTCGGTTCTCGGGGGATTTGCTTTTATCTGCATGTTGATAGTTGCATTCCTTTTAGTGTTAAAATGCAGGAAACCAAAGCCTGTGGATACTGTAACATGTTTGCCACTTCCTGAAGGGAACACTAATGCATCCCCTGTCCCAGATTTAAATCTAGGCTTAAAGATTCCTTTTGCTGATATACTGCTTGCAACTAACAATTTTGACAATAAGTTGCTCATAGGAGTTGGTGGATTTGGGAAAGTCTATAAAGGGGTGCTCAGGACCAGCATGAAAGTCGCCGTGAAGCGTGGTGAACTGGTGTCAGACCAGGGCCTTCCAGAATTCCAGGCGGAGATCATGGTGTTTTCCAAAATTCGTCATCGACATCTGGTTTCCTTGGTTGGATATTGTGATGAAAGGTCGGAGATGATACTGGTCTATGAATTCATGGAAGAAGGGACATTGAGAAATCATCTTTACGGTTCAGATTTGCCTCGTTTGTCTTGGAAGCAGAGGCTTCAGATATGCATTGGTTCAGCAAGGGCCCTTCATTATCTCCATACCAGTTCACTTGGGGGAATCATTCATCGTGATGTTAAGTCGACAAACATCTTGCTTGATGAGAACTATGTCGCTAAAGTTTCTGATTTTGGTCTTTCAAGGTCGGGGCCTTCTCTCGATCAGACCCATGTAAGTACGAGTGTAAAAGGTAGCTTTGGGTACCTTGATCCAGAGTATTTTAGACGTCAGAAGTTAACAGATAAATCAGATGTGTACTCCTTTGGAGTGGTGCTTCTTGAAGTACTTTGTGCGAGACCTGCCCTTGATACTTTGCTTCCAAGGGACCAGGTGAACTTAGCTGAATGGGGTATGCAGAGGAAGAAGAAGGGCTTAATCGAGCAGATTATTGATCCTTTGCTTGTGGGTAAAATTCATCCTGATTGTCTGAGGAAATTCGGGGAGATAGCAGAGAAATGTTTGAGTGAATATTGTGTGGACAGGCCGACTATGGGTGATGTGGTGTGGGACTTGGAATATGCACTCCAACTTCAAGAGAGTGCAGTGCACAGAGAAGCGCACGAGGACACCACCAACTGTGCAGTGTCTGAGCTCCCGTTGCGCACTGTTCCGCGTGTTCTTTCAGCCGTCATGCCAGTTGGGAAGGATGATATACCCCTAAACAGTGATGGAGGTTCCGACACAACAGCAAGCCAAGTGTTCTCTCAATTGATGATCAATGAAGGCAGATAG 2472 0.4341 MDNLLTQSTFLSLLLLHLSFLLLISLAYAQDPYFINCGSDTSIPVDVRTTFVGDSGHSSFTLSATPDISVKDQSTSQSSSPELYQTARIFKRPSSYEFNINSTGATLLVRFHFFPFSTPAYDLASAVFDVSVTGFSLLKNFSVRRSNDLPMLKEYLFSNNSGKFTIYFMPSQNSFAFINAIEVFSAGENLIQDKFISLAKGDVNKSLLSQFLLKVHRINVGGPDITPHIDSLRRSWIPDERYLHVKEAAEPKSITEQLQDRERVSQKIAPDHVYQSCQEMNKHYHTASNIFNLTWIFNVRSGVNHLVRMHFCDIVSDEMENLYVKVYIDRYDGHEIYISAETYNIPRAPYYIDFVAKSQDSGNMTISVGPILSLDKGGNAILNGLEIMEIGNDTESLISLQNKSKKNHVFVLVGSVLGGFAFICMLIVAFLLVLKCRKPKPVDTVTCLPLPEGNTNASPVPDLNLGLKIPFADILLATNNFDNKLLIGVGGFGKVYKGVLRTSMKVAVKRGELVSDQGLPEFQAEIMVFSKIRHRHLVSLVGYCDERSEMILVYEFMEEGTLRNHLYGSDLPRLSWKQRLQICIGSARALHYLHTSSLGGIIHRDVKSTNILLDENYVAKVSDFGLSRSGPSLDQTHVSTSVKGSFGYLDPEYFRRQKLTDKSDVYSFGVVLLEVLCARPALDTLLPRDQVNLAEWGMQRKKKGLIEQIIDPLLVGKIHPDCLRKFGEIAEKCLSEYCVDRPTMGDVVWDLEYALQLQESAVHREAHEDTTNCAVSELPLRTVPRVLSAVMPVGKDDIPLNSDGGSDTTASQVFSQLMINEGR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00992 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Eupl03g00992 823 FunFam receptor-like protein kinase FERONIA 452 556 - -
Eupl03g00992 823 Gene3D Transferase(Phosphotransferase) domain 1 557 777 - -
Eupl03g00992 823 FunFam Putative receptor-like protein kinase 210 391 - -
Eupl03g00992 823 SMART serkin_6 481 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00992 823 Pfam Malectin-like domain 35 389 IPR024788 -
Eupl03g00992 823 ProSitePatterns Protein kinases ATP-binding region signature. 487 509 IPR017441 GO:0005524
Eupl03g00992 823 FunFam Receptor-like protein kinase FERONIA 557 771 - -
Eupl03g00992 823 Pfam Protein tyrosine and serine/threonine kinase 486 749 IPR001245 GO:0004672|GO:0006468
Eupl03g00992 823 PANTHER OS07G0166700 PROTEIN 468 758 IPR045272 GO:0004714|GO:0006468
Eupl03g00992 823 Gene3D Phosphorylase Kinase; domain 1 455 556 - -
Eupl03g00992 823 Gene3D - 31 187 - -
Eupl03g00992 823 Gene3D - 214 391 - -
Eupl03g00992 823 FunFam Putative receptor-like protein kinase 32 187 - -
Eupl03g00992 823 SUPERFAMILY Protein kinase-like (PK-like) 465 751 IPR011009 -
Eupl03g00992 823 CDD STKc_IRAK 487 752 - -
Eupl03g00992 823 ProSiteProfiles Protein kinase domain profile. 481 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00992 Eupl-Chr3 33351884 33354355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00992 13 823 Receptor kinase-like Gene Family AT3G46290 44.893 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Eupl03g00992 Malectin_like 7.6e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00992 - - ming:122069375 835.484