Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00950 ATGGCAGCAGACAAAGATACCAACCTCTCAGACATCCTAGACGAAGACGAGCTAGACGAAGAACCAGGCGAGGTAATCGAATCCGCACCCCCTCTCAAGGTGGGAGAAGAGAGGGAGATTAACAAATCGGGCCTGAAGAAGAAGCTCCTCAAGCTTGGCTATGGGTGGGAGACTCCCGAGTTTGGTGATGACATTACTGTTCACTATGTGGGTACTTTACTTGATGGAAGCAATTTCATTTCCAGTAAAGATAACGGGGAACCCTTCACTTTTAAGCTCGGCCATGGTGAAGTTGTAACTGGGTTGGATCATGGCATAATTACCATGAAAAAGGGGGAAGTGGCATTGTTCACATTACCTTCTGATTTGGGATATGGAAATGTGGGTGGGGACAGTGTTCCTCCCAATTCCGATATTCAGTTCGAGGTAGAACTCGTGTCTTGGATCACAGTGGTGGACGTCTGCAAAGATGGTGGAATTATCAAGAAAGTTTTGGAGAAAGGGCAGAGGAACGATCAGCCGGGTGATTTGGATGAAGTTACCGTAAAGTACCAAGTGATGCTGGTTGATAATACAGTTGTTGCAAAATCTCCTGAAGAAGGAGTGGAGTTTTATGTCAAAGATGGTCATTTCTGTCCAGCATTGCCGAAGGCACTCAAGACCATGAGAACAGGAGAGAAGGTCAAATTAATCGTTCAACCTCATTGTATGTTTCTCCATTGTTGTTGTAACCTGATGTCTTGA 744 0.453 MAADKDTNLSDILDEDELDEEPGEVIESAPPLKVGEEREINKSGLKKKLLKLGYGWETPEFGDDITVHYVGTLLDGSNFISSKDNGEPFTFKLGHGEVVTGLDHGIITMKKGEVALFTLPSDLGYGNVGGDSVPPNSDIQFEVELVSWITVVDVCKDGGIIKKVLEKGQRNDQPGDLDEVTVKYQVMLVDNTVVAKSPEEGVEFYVKDGHFCPALPKALKTMRTGEKVKLIVQPHCMFLHCCCNLMS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00950 247 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 149 IPR001179 GO:0003755
Eupl03g00950 247 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 158 235 - -
Eupl03g00950 247 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 238 IPR001179 GO:0003755
Eupl03g00950 247 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 146 IPR001179 GO:0003755
Eupl03g00950 247 SUPERFAMILY FKBP-like 153 238 - -
Eupl03g00950 247 Gene3D - 33 151 IPR046357 GO:0003755
Eupl03g00950 247 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 238 IPR001179 GO:0003755
Eupl03g00950 247 MobiDBLite consensus disorder prediction 10 24 - -
Eupl03g00950 247 MobiDBLite consensus disorder prediction 1 30 - -
Eupl03g00950 247 SUPERFAMILY FKBP-like 39 150 - -
Eupl03g00950 247 Gene3D - 152 240 IPR046357 GO:0003755
Eupl03g00950 247 FunFam Peptidyl-prolyl cis-trans isomerase 37 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00950 Eupl-Chr3 32597577 32599083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00950 27 238 Calmodulin-binding Proteins AT5G48570 57.746 2.00e-80 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00950 K09571 - nnu:104608797 374.785