Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00949 ATGGCAGCAGACAAAGATACCAACCTCTCAGACATCCTAGACGAAGACGAGCTAGACGAAGAACCAGGCGAGGTAAACGAATCCGCACCCCCTCTCGAGGTGGGAGAAGAGAGGGAGATTAACAAATCGGGCCTGAAGAAGAAGCTCCTCAAGCTTGGCTATGGGTGGGAGACTCCCGAGTTTGGTGATGACGTTACTGTTCACTATGTGGGTACTTTACTTGATGGAAGCAATTTCATTTCCAGTAAAGATAACGGGGAACCCTTCACTTTTAAGCTCGGCCATGGTGAAGTTGTAACTGGGTTGGATCATGGCATAATTACCATGAAAAAGGGGGAAGTGGCATTGTTCACATTACCTTCTGATTTGGGATATGGAAATGTGGGTGCGGACAGTGTTCCTCCCAATTCCGATATTCAGTTCGAGGTAGAACTCGTGTCTTGGATCACAGTGGTGGACGTCTGCAAAGATGGTGGAATTATCAAGAAAGTTTTGGAGAAAGGGGAGAGGAACGATCAGCCGGGTGATTTGGATGAAGTTACCGTAAAGTACCAAGTGATGCTGGTTGATAATACAGTTGTCGCAAAATCTCCTGAAGAAGGAGTGGAGTTTTATGTCAAAGATGGTCATTTCTGTCCAGCATTGCCGAAGGCACTCAAGACCATGAGAACAGGAGAGAAGGTCAAATTAATCGTTCAACCTCATTATGCCTTTGGAGATCATGGGATGGATGCTAACAATGGATTTCCTTCCATCCCCACAAATTCCGTGTTAAATATTGATCTTGTGTTGGTATCCTTCAAACCTGTCATTGATGTTACTGGTGATTCCATGGTTTTGAAAAAGATTTTGAAGGAGGGAGAAGGCACTCATACTGCAAATGAAGGGGCAGCTGTTACTATTAGATATACCGCTAAGCTGGAAGATGGCACTATATTTGAGAAAAAAGGTTTCGATGGAACTGGACTCTTGGAATTTGTCATTGATGAAGAACAAGTGACTGCTGGGTTAGATCGAGCAGCAGCAACAATGAAAAAGGGTGAACTGTCCATTGTGACAGTAAAACCAGAATACGGGTTTGGGAGCATTGAAGCTGAACGGGATCTTGCTATCGTACCTCCATGTTCCAGTGTTGTTTACGAAGTAGAAATGGTAGATTTTACTAAGGTAGTGCTTATTTTCTTAAATAGATCTGAAGTGTGGTCTTTCGTGATGATAGTCGGGTTCTGTGATAGATTTCTAAGAGTGATTAGGTGGTACATTGGTAGTGCCTATTTTCCTGTTACTAGTACTATTGTATCTTTGCTGTCACAGGAGAAAGCACCTTGGGAGATGAATAATCATGAGAAAATTGGGGCAACCAGGAAGAAGAAAGAAGAAGGCAACATATTGTTTAAGAGTTGGAAGTATCAGCAAGCAGCGAAAAGATATGACAAGGCTGCGGACTACGTCATTGAGGATGGGTCCTTTGGGGACGATGAGCTAATGCTGGTTAAAGCTTTGAGAGTGTCTTGCTGGTTGAATCATGCTGCATGCAGCCTCAAATTAAATAACTTTCAGGAAGCAATCGAGTTATGTTCGAAGGTGCTAGATATTGAGTGCCACAACGTGAAGGCATTGTACAGAAGGGCACAAGCTTATATGGAAACTGCAGATTTGGACCTGTCCGAGTTGGACATCAAGAAAGCCCTTGAGGTTGATCCTCACAACAGGGAGGTGAAATCAATGCATACATCACTGAAACAACTCCAGGCTGAGAGCAACAAGAGAGATGCAAAGCTCTACGCAAACATGTTTGCACGGATGAGGAACGACTCGGCTGTGGTAGCAAAGAGATTGAAGGTTGAGAAAGCAGAGGATGAGAAGGATGGGTTTGATGCAATGGAAATGGAAAATGTGTTGCAGTGA 1908 0.4382 MAADKDTNLSDILDEDELDEEPGEVNESAPPLEVGEEREINKSGLKKKLLKLGYGWETPEFGDDVTVHYVGTLLDGSNFISSKDNGEPFTFKLGHGEVVTGLDHGIITMKKGEVALFTLPSDLGYGNVGADSVPPNSDIQFEVELVSWITVVDVCKDGGIIKKVLEKGERNDQPGDLDEVTVKYQVMLVDNTVVAKSPEEGVEFYVKDGHFCPALPKALKTMRTGEKVKLIVQPHYAFGDHGMDANNGFPSIPTNSVLNIDLVLVSFKPVIDVTGDSMVLKKILKEGEGTHTANEGAAVTIRYTAKLEDGTIFEKKGFDGTGLLEFVIDEEQVTAGLDRAAATMKKGELSIVTVKPEYGFGSIEAERDLAIVPPCSSVVYEVEMVDFTKVVLIFLNRSEVWSFVMIVGFCDRFLRVIRWYIGSAYFPVTSTIVSLLSQEKAPWEMNNHEKIGATRKKKEEGNILFKSWKYQQAAKRYDKAADYVIEDGSFGDDELMLVKALRVSCWLNHAACSLKLNNFQEAIELCSKVLDIECHNVKALYRRAQAYMETADLDLSELDIKKALEVDPHNREVKSMHTSLKQLQAESNKRDAKLYANMFARMRNDSAVVAKRLKVEKAEDEKDGFDAMEMENVLQ* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00949 635 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 177 268 IPR001179 GO:0003755
Eupl03g00949 635 MobiDBLite consensus disorder prediction 1 37 - -
Eupl03g00949 635 SMART tpr_5 503 536 IPR019734 GO:0005515
Eupl03g00949 635 SMART tpr_5 537 570 IPR019734 GO:0005515
Eupl03g00949 635 Gene3D - 151 268 IPR046357 GO:0003755
Eupl03g00949 635 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 296 388 IPR001179 GO:0003755
Eupl03g00949 635 Pfam Tetratricopeptide repeat 538 570 IPR019734 GO:0005515
Eupl03g00949 635 FunFam Peptidylprolyl isomerase 442 597 - -
Eupl03g00949 635 ProSiteProfiles TPR repeat profile. 537 570 IPR019734 GO:0005515
Eupl03g00949 635 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 261 IPR001179 GO:0003755
Eupl03g00949 635 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 290 384 IPR001179 GO:0003755
Eupl03g00949 635 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 146 IPR001179 GO:0003755
Eupl03g00949 635 MobiDBLite consensus disorder prediction 10 26 - -
Eupl03g00949 635 Gene3D - 35 150 IPR046357 GO:0003755
Eupl03g00949 635 SUPERFAMILY FKBP-like 40 150 - -
Eupl03g00949 635 FunFam Peptidylprolyl isomerase 269 390 - -
Eupl03g00949 635 Gene3D - 270 390 IPR046357 GO:0003755
Eupl03g00949 635 Gene3D Tetratricopeptide repeat domain 440 597 IPR011990 GO:0005515
Eupl03g00949 635 PANTHER PEPTIDYLPROLYL ISOMERASE 38 147 - -
Eupl03g00949 635 SUPERFAMILY FKBP-like 273 399 - -
Eupl03g00949 635 FunFam Peptidyl-prolyl cis-trans isomerase 37 149 - -
Eupl03g00949 635 SUPERFAMILY FKBP-like 157 269 - -
Eupl03g00949 635 SUPERFAMILY TPR-like 454 591 IPR011990 GO:0005515
Eupl03g00949 635 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 149 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00949 Eupl-Chr3 32503797 32516656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00949 27 602 Calmodulin-binding Proteins AT5G48570 50.690 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00949 K09571 - nnu:104608797 870.537