Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00933 ATGGCCCCCACGTCAGCAACTTTGTGTCGCGTCGGTCCCACAATCTTACTTTTCTTCGTCCTTAAATACCGCTCTCCTACGCCTCGTTTCTTCCCTTTCCCTCTCCTCCCTCCCTCCGTCTCTTATTTTGTAAGCGGTATTCCGGCCATGTCAGAAGTATTCGATATTCCATTTCCGCTTTTCGAAGGCGGTTTTACCCCCTGGGAAAACCAGGACCTCATGTCCATCTTCCCACCGCAAAACCCTGTCAATTCGAATTCCGGTTCTGACGAACCGAACCGGGAGGTTTCTACCGTGGACGATCGGAAGCGGAAACGGATGATCTCGAACCGGGAATCGGCTAGGCGGTCTCGCATGCGTAAACAGAGGCATTTGGAAGACCTCCGGAACCAGGTGAACCGGCTGAGAACTGAAAACCGGGATATCACGAACCGCTTGGGCATCATTACTCATCACTGCCACCTCTTACGTAGAGATAACGACCTGCTCCGATCTGAATCTGCCGTTCTCCGGCAGAGATTGTTGGATATTCGCCAAATTCTGATTTTCCGGCAGCTCCAACTCTTCTCCTCCCCGTCGCCGTGCAATACCGTTACCTCCGTGAACGAGTACCCCCCCTCATTAATTGCGTAA 633 0.5245 MAPTSATLCRVGPTILLFFVLKYRSPTPRFFPFPLLPPSVSYFVSGIPAMSEVFDIPFPLFEGGFTPWENQDLMSIFPPQNPVNSNSGSDEPNREVSTVDDRKRKRMISNRESARRSRMRKQRHLEDLRNQVNRLRTENRDITNRLGIITHHCHLLRRDNDLLRSESAVLRQRLLDIRQILIFRQLQLFSSPSPCNTVTSVNEYPPSLIA* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00933 210 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 105 120 IPR004827 GO:0003700|GO:0006355
Eupl03g00933 210 FunFam BZIP transcription factor 100 151 - -
Eupl03g00933 210 Coils Coil 111 145 - -
Eupl03g00933 210 CDD bZIP_plant_GBF1 103 154 IPR045314 GO:0003700|GO:0006355
Eupl03g00933 210 SMART brlzneu 98 162 IPR004827 GO:0003700|GO:0006355
Eupl03g00933 210 Pfam bZIP transcription factor 101 160 IPR004827 GO:0003700|GO:0006355
Eupl03g00933 210 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 100 163 IPR004827 GO:0003700|GO:0006355
Eupl03g00933 210 SUPERFAMILY Leucine zipper domain 102 154 IPR046347 GO:0003700|GO:0006355
Eupl03g00933 210 MobiDBLite consensus disorder prediction 94 122 - -
Eupl03g00933 210 MobiDBLite consensus disorder prediction 76 93 - -
Eupl03g00933 210 PANTHER BZIP TRANSCRIPTION FACTOR 44 81 184 - -
Eupl03g00933 210 Gene3D - 101 180 - -
Eupl03g00933 210 MobiDBLite consensus disorder prediction 76 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00933 Eupl-Chr3 32278392 32279944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00933 85 188 bZIP Transcription Factor Family AT2G22850 57.143 2.00e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl03g00933 bZIP_1 3.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00933 - - tcc:18611325 185.267