Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00927 ATGGATTTTGGGGTGGTGGGTTGGGATGGTTTGGTGGGTTCTGAAAGTGGTTTTCCTTCGCTGGTTTCAGAAGCTGAAACCAGACGAAAGGGGTACGGATCTGGGTTTCTTAAGCAAGAGAGATCATCTGGGTCTGCTGAAGATGATTGGAGAAGCTTAAAAATGCCAAGAACTGATGATTTTTCAGTCTCGAAGACAATGCTGCTTCAGCAGAGGACCCCTTCATTACTGCGATCTAATTCTCTTTTTTCTGATGGAACACAACAGCAGCAGATGCTGAGCTTCTCTTCTCCCAAATCAGACTCTTTCTTACTCAGCAACGACGCAACCTTGCCTTACTATCACCATGCCTTGTCTACTTATACTAGAAATACAGGTTTGGGTTCTGGAAGCTTGAATACAAGCATGCATGGAGTTTTAACTGGGGTTAGAGGCCCATTCACTCCTTCCCAGTGGATGGAGCTGGAACATCAGGCCTTGATCTACAAATACATCAATGCAAATGTGCCCATACCTTCTAATCTGCTCATCCCCATCAGAAAAGCCCTCAACCCATCTGTGTTCTCTAGCTTTGCTGGATCCTTGAGACCCAATACATTGGGATGGGGTTCTTTCCATCTGGGGTTCTCCAGTAACACCGATCCCGAGCCAGGGAGGTGTCGTCGGACTGATGGGAAGAAATGGCGGTGCTCAAGAGACGCAGTTGCCGACCAGAAGTACTGTGAGCGGCACATGAACAGGGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAGACTGGCCATGCCGCCGCCGCCACCACGAAGGTGATGCCGATGGCTTCCTCGTCGTCGGCATCAGTGGTCTCAGGTGGTGGTGCATCCAACAGCCTCGCCATTACACAGCACCAGATCAAGAGCTTGCAGCCTGGTGTCAGTGATCCTTCTGCAAACTCACACATTAACAGGATTTTACTGAACAAAGAGAATGTGGGCAGCTGTCTGCAAGATTCACAAGGCCTCTCCATGCTATCTCCCACTATGAACCTGAAATCCAAAGATAACCCGTTCTCCGTCCCAAAACAACACATACCATTTGAAGAATCCTCTCGAATGGAATTTGGACTCGTCTCGTCTGATTCCCTTTTAAATCCTTCCCAGAGAAGCTCCTACATAGATTGCAGAAACTTTGGTTCTTCTCCCAACCTTAATGACCGAGAACCCCAAGCCCAAGATCCTCTTCGCCATTTCATTGATGACTGGCCCAAGAGCCAGTCTGATCGCTCGACCATTGCCTGGTCTGAAGTAGAAGAAATCCAATCAGACCGGACCCAGCTCTCAATTTCGATCCCTGTGGCTTCCTCAGACTTCTCTTCATCCTCTTCCTCACCCACCCATGAGAAACTCACTCTCTCCCCACTGAGGTTATCGCATGAGTTCGACCCAATTCAGATGGGTTTAGGGGTGGGTAGCATCCTAAACGAACCAACTCAAAGGCAGGCGAACTGGATACCAATCTCTTGGGAGACTTCCATGGGGGGACCTCTTGGGGAGGTCTTGAACAGTACCAATAACACTGCTGGAGACTGCAAGAACTCATCGTCAGCCCTTAACCTAATGACTGAAGGATGGGATGCCAGCCCTAAGATGGGGTCATCCCCAACCGGAGTCCTACAGAAGACCTTCGGCTCACTTTCTAACAGCAGCACAGGTAGCAGCCCAAGAGCTGAAACTAACAAGATCCATAATGGGGCTAGCCTGTGTAGTGAACTCCTTGGCTGA 1761 0.4957 MDFGVVGWDGLVGSESGFPSLVSEAETRRKGYGSGFLKQERSSGSAEDDWRSLKMPRTDDFSVSKTMLLQQRTPSLLRSNSLFSDGTQQQQMLSFSSPKSDSFLLSNDATLPYYHHALSTYTRNTGLGSGSLNTSMHGVLTGVRGPFTPSQWMELEHQALIYKYINANVPIPSNLLIPIRKALNPSVFSSFAGSLRPNTLGWGSFHLGFSSNTDPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEGQTGHAAAATTKVMPMASSSSASVVSGGGASNSLAITQHQIKSLQPGVSDPSANSHINRILLNKENVGSCLQDSQGLSMLSPTMNLKSKDNPFSVPKQHIPFEESSRMEFGLVSSDSLLNPSQRSSYIDCRNFGSSPNLNDREPQAQDPLRHFIDDWPKSQSDRSTIAWSEVEEIQSDRTQLSISIPVASSDFSSSSSSPTHEKLTLSPLRLSHEFDPIQMGLGVGSILNEPTQRQANWIPISWETSMGGPLGEVLNSTNNTAGDCKNSSSALNLMTEGWDASPKMGSSPTGVLQKTFGSLSNSSTGSSPRAETNKIHNGASLCSELLG* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00927 586 MobiDBLite consensus disorder prediction 554 574 - -
Eupl03g00927 586 SMART QLQ_2 145 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl03g00927 586 Pfam WRC 215 257 IPR014977 -
Eupl03g00927 586 ProSiteProfiles QLQ domain profile. 146 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl03g00927 586 ProSiteProfiles WRC domain profile. 214 258 IPR014977 -
Eupl03g00927 586 Pfam QLQ 146 180 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl03g00927 586 PANTHER GROWTH-REGULATING FACTOR 5 87 453 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00927 Eupl-Chr3 32152534 32156194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00927 1 556 GRF Transcription Factor Family AT2G22840 47.449 3.83e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Eupl03g00927 WRC 3.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00927 - - nnu:104609045 890.182