Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00924 ATGGAGGTTCCTTTGGACCCTCATCATGTTCATCAACATCATCATCATCCAACACAGGCTTCCACTGCTGCTGTTTCTACTGCAATTCCAACAGGCTTCTTCCTTTCTCCTTCTCAGTTAAACAACTCTGGAATCTGTCATGGGGTTGAAGGAGAAAGCAGTCGGTTTTACTCTCACTTTCTCCAGCTCCCTCCAATGGCAGAGGATGGGATTCCAGGCTTGAAGAACTGGGTTTCTAGGCACTATTCTACCAACCACGCCATGGAGCAGAAGATGGCTGGTTGCATGGGTGATGATAGTGGAGGGTCTGGGTCTGTTGGTGCAATGGGCTATGGGGGTTTGCAGTCTTTGAGCTTGTCCATGAGCCCTGGTTCACAGTCAAGCTGTGTTACAGCTCCACAACAGATCTCACCTGCTGGAACTGAGTGTGTAGCTATGGAAACAAAGAAGAGAGGCTCTGGAAAAGTAGGTCAGAAGCAACCAGTTCATAGGAAGTCCATTGACACATTTGGGCAGAGAACATCACAGTATAGAGGTGTTACAAGGCATAGATGGACTGGTAGATATGAGGCCCATCTATGGGACAACAGTTGCAAGAAGGAAGGGCAGACCAGAAAAGGGAGACAAGGGGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCTAGCGGCCCTGAAGTATTGGGGACCTGCGACATATATCAACTTCTCGTTGGAGAATTACCAAGAACAACTTGAAGAAATGAAGAACATGAGCAGGCAGGAATATGTTGCTCACTTGAGAAGGAAAAGCAGTGGGTTCTCGAGAGGGGCTTCGATATACCGAGGAGTAACAAGGCATCATCAACATGGAAGATGGCAAGCTCGGATCGGCAGGGTTGCGGGAAACAAAGACCTTTATCTTGGGACATTTAGCACCCAAGAGGAAGCAGCTGAAGCTTATGATATTGCTGCAATCAAATTTCGAGGGGTAAATGCTGTCACCAATTTTGACATAACAAGATATGATGTGGAACGGATTACAGCGAGCAGTACCCTCCTCGCTGGAGAATTCGCCAAGCGAAACAAAGAGATAGCATCCAACAATGTAGCTCTTGATCACCACCCCTCTGCTCAGAACAGCAGTGGGGAAGCTGGTTTATCAGAACAGAACAACAATGGTGGATCAGACTGGAAAATGGTCTTATATCACTCCTCCCAACAACAACCAACAAACACGGTTGAACCCCTTGATCAGAAACCAATACCCATTGGGAATTACAGGAACCCATCATTCTCGGCTGCCCTACACGATCTGATTGGGATTGATACCATGAATTCAGCCCAAAAAGGGGTGGAAGACTCAGCGACGCTTGGGGCCCATTTATCAAATGCTTCTTCATTGGTGACCAGCCTAAGCAGCTCAAGAGAAGGCAGCCCTGATAAGACTGGCCTTTCGATGCTCTTTGCGAGGCCCCCCTCTGCCATCAGCCCAACCACCTCAATGGATTCTTGGATCCCATCAGCCCATCTGAGGCCTGTAGTCTCTATGCCTCACTTGCCAGTTTTTGCTGCTTGGACTGATGCCTAA 1575 0.4794 MEVPLDPHHVHQHHHHPTQASTAAVSTAIPTGFFLSPSQLNNSGICHGVEGESSRFYSHFLQLPPMAEDGIPGLKNWVSRHYSTNHAMEQKMAGCMGDDSGGSGSVGAMGYGGLQSLSLSMSPGSQSSCVTAPQQISPAGTECVAMETKKRGSGKVGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPATYINFSLENYQEQLEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVERITASSTLLAGEFAKRNKEIASNNVALDHHPSAQNSSGEAGLSEQNNNGGSDWKMVLYHSSQQQPTNTVEPLDQKPIPIGNYRNPSFSAALHDLIGIDTMNSAQKGVEDSATLGAHLSNASSLVTSLSSSREGSPDKTGLSMLFARPPSAISPTTSMDSWIPSAHLRPVVSMPHLPVFAAWTDA* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00924 524 CDD AP2 175 238 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 Coils Coil 236 260 - -
Eupl03g00924 524 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 129 406 - -
Eupl03g00924 524 PRINTS Ethylene responsive element binding protein signature 177 188 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 PRINTS Ethylene responsive element binding protein signature 315 335 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 ProSiteProfiles AP2/ERF domain profile. 275 333 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 SUPERFAMILY DNA-binding domain 175 240 IPR016177 GO:0003677
Eupl03g00924 524 SMART rav1_2 275 339 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 SMART rav1_2 176 245 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 CDD AP2 274 335 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 Pfam AP2 domain 176 231 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 Pfam AP2 domain 275 325 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 Gene3D AP2/ERF domain 275 335 IPR036955 GO:0003700|GO:0006355
Eupl03g00924 524 Gene3D AP2/ERF domain 175 241 IPR036955 GO:0003700|GO:0006355
Eupl03g00924 524 MobiDBLite consensus disorder prediction 368 393 - -
Eupl03g00924 524 FunFam AP2-like ethylene-responsive transcription factor 274 335 - -
Eupl03g00924 524 ProSiteProfiles AP2/ERF domain profile. 176 239 IPR001471 GO:0003700|GO:0006355
Eupl03g00924 524 MobiDBLite consensus disorder prediction 1 23 - -
Eupl03g00924 524 FunFam AP2-like ethylene-responsive transcription factor ANT 175 241 - -
Eupl03g00924 524 SUPERFAMILY DNA-binding domain 274 334 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00924 Eupl-Chr3 32043603 32046971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00924 101 357 AP2-EREBP Transcription Factor Family AT4G37750 73.958 8.86e-139 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl03g00924 AP2 3.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00924 K09285 - nnu:104609075 733.791