Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00923 ATGGGTGCGGATGATAATGTTGATTTGGGGTTTCAACAGAGAAGTGGGAGACTTCTGAATTGTCCATTTTCGGCGATGTACACAGCTCCGCAAACTGAGAAGGTTGCGGGAATGACAATGAGCTCAATGTCGATGTGTAAATCTTCGAATGGAGTAGACTCGTTCATCGGTACTGGTTGGGATCCGCTTGTTTCACTGGCGCAGAATGTGGATTTTAAAGGTTCTTCAATGGCATCTCACCATCATATTGCTATTTCTCCCTACAGTGTCGGTGTATTGGAAAACCGGGGAATCAATAGCACCTCTCACCTGGATCAGTATCCATCCGATCCTAGTCACGTTGAGCTAGCACATAAGCTTCCATTCTTTGGCAGTACAAGCTTCTCAGATATGGTTAGTTCTTTTGGCCTGCCCGAGTGTGGCCAGATTGCTCCTGCTGGTTGTCCTTCTGATTACCCTTTGACCAAGGAGGGTGGCACCGAAAAGAATTCAACAAATTCAAGGAAGGTGGCTGATCATGGTGCAATATTCCAAGAGGACCTCTCGATTTCGGATGAGGGGGACAGAGAACCTTCGCCTAGCGGAAAGAAAAGGAAAAGGGTGCCTGATTGTCGTTCAGGGGAGAATAATTCTCAATTTGGTTCCATTCCGAGTGCGGAGGCAGAGCAACAAACAGATGTATCACAAGAGACCCCTGAGGGTCTGAAAGAGCAAGATGAGAAGAGACAGAAAACTGAAAAGAACACTGGTACGAATTTGCGTGGTAAGCTAACTGGTAAACAAGCTAAAGACAGTTCCCAGAATGGGCTAGCTCCAAAAGACGATTACATTCATGTGAGAGCCAGGCGAGGCCAGGCTACCAATAGCCACAGCCTCGCAGAAAGAGTAAGAAGAGAAAAGATTAGTGAGCGGATGAAGTTTCTTCAAGATCTTGTTCCGGGATGCAATAAGATCACTGGGAAGGCGGTAATGCTTGATGAGATTATCAACTATGTGCAATCACTGCAACGGCAGGTCGAGTTTCTGTCGATGAAACTTGCCACTGTCAATCCTGAAGTGAATATTGATATTGAACGGATTCTATCCAGAGATATTCTTCATTCACGGGGTGGTGGTTCAGCTATTCTCGGATTTGGTCCAGGAATGAGCTCCTCTCATCCTCAGCCACATATAAACCTACATGAAGCAATGCAAGCTATCCAGAGTACAGACACACACTTACCCCCCATGCCACAGATACCAAGTGTGTGGGACGATGATCTACAAAACCTTTTTCAGATGGCCTTCGTCTCTAACCCAGCTCTTGACAGTTTGGGACTGAACGGTCACATGAAAGTGGAGCTATAG 1347 0.4633 MGADDNVDLGFQQRSGRLLNCPFSAMYTAPQTEKVAGMTMSSMSMCKSSNGVDSFIGTGWDPLVSLAQNVDFKGSSMASHHHIAISPYSVGVLENRGINSTSHLDQYPSDPSHVELAHKLPFFGSTSFSDMVSSFGLPECGQIAPAGCPSDYPLTKEGGTEKNSTNSRKVADHGAIFQEDLSISDEGDREPSPSGKKRKRVPDCRSGENNSQFGSIPSAEAEQQTDVSQETPEGLKEQDEKRQKTEKNTGTNLRGKLTGKQAKDSSQNGLAPKDDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPEVNIDIERILSRDILHSRGGGSAILGFGPGMSSSHPQPHINLHEAMQAIQSTDTHLPPMPQIPSVWDDDLQNLFQMAFVSNPALDSLGLNGHMKVEL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00923 448 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 185 397 IPR024097 GO:0006355
Eupl03g00923 448 Pfam Helix-loop-helix DNA-binding domain 288 336 IPR011598 GO:0046983
Eupl03g00923 448 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 285 335 IPR011598 GO:0046983
Eupl03g00923 448 SMART finulus 291 341 IPR011598 GO:0046983
Eupl03g00923 448 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 283 353 IPR036638 GO:0046983
Eupl03g00923 448 MobiDBLite consensus disorder prediction 151 275 - -
Eupl03g00923 448 MobiDBLite consensus disorder prediction 206 231 - -
Eupl03g00923 448 Gene3D - 282 356 IPR036638 GO:0046983
Eupl03g00923 448 FunFam Basic helix-loop-helix transcription factor 282 354 - -
Eupl03g00923 448 MobiDBLite consensus disorder prediction 250 268 - -
Eupl03g00923 448 CDD bHLH_AtBPE_like 275 360 - -
Eupl03g00923 448 MobiDBLite consensus disorder prediction 232 249 - -
Eupl03g00923 448 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00923 Eupl-Chr3 32018633 32022848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00923 183 448 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 49.438 1.86e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl03g00923 HLH 5.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00923 - - nnu:104609097 535.798