Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00893 ATGGGTTTTCAAGATATTTGTAATACAGGTCTTGGTCTGGGTTTAGGCTATGAAGGGAGGCTTGAGAATCGATTCAAATCCGATCAACAACGACAGAAACCATGCTTTAAACTTGATCATTTAGAGCCGTCCTTAACATTAGGCCTTTCGGATGAGACGTATCAAGCAGCGGGGAGAATCGACATGAATAAAGAGTATGAGGAGTTTATCAATGTACATCGACAAGCTTCTCCTCCTGCCGCTGTGTCGTCGTTCTCTAACGCAAGCGTCAAGAAGGAAAAGGACCTTGGGAGTGAAGAGATGGAGGGAGAGAGGGTTTCTTCTAGGGTTAGTGATGAAGAAGAAGAGGGTGGTGCAAGAAAGAAACTTAGACTTACCAAAGAACAATCTGCTCTTTTAGAGGACAGTTTCAAAGAACACAGTACTCTCAATCCGAAACAAAAACAAGCCTTAGCGAAGCAATTGAATCTACGGCCTCGACAAGTTGAAGTGTGGTTCCAAAACAGGAGAGCCAGGACAAAGCTGAAACAAACGGAAGTAGACTGCGAGTTCTTGAAGAAATGTTGTGAGAGTCTAACAAACGAGAACAGGAGGCTACAGAAGGAACTACAAGAACTGAAAGCATTAAAACTAGCACCACCACTGTACATGCAACTTCCGGCAGCCACCCTCACCATGTGCCCATCTTGCGAGAAAATCGGTGGCGTTGGGGAGAGCTCCTCAAAGAATAACCCATTTACAATGGGACCTAAACCTCACTTCTATAATCCTTTCACCCATCCATCTGCAGCTTGTTAG 798 0.4461 MGFQDICNTGLGLGLGYEGRLENRFKSDQQRQKPCFKLDHLEPSLTLGLSDETYQAAGRIDMNKEYEEFINVHRQASPPAAVSSFSNASVKKEKDLGSEEMEGERVSSRVSDEEEEGGARKKLRLTKEQSALLEDSFKEHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCESLTNENRRLQKELQELKALKLAPPLYMQLPAATLTMCPSCEKIGGVGESSSKNNPFTMGPKPHFYNPFTHPSAAC* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00893 265 Gene3D - 112 181 - -
Eupl03g00893 265 SMART halz 176 219 IPR003106 GO:0006355|GO:0043565
Eupl03g00893 265 SMART HOX_1 118 180 IPR001356 GO:0003677
Eupl03g00893 265 MobiDBLite consensus disorder prediction 77 91 - -
Eupl03g00893 265 ProSitePatterns 'Homeobox' domain signature. 151 174 IPR017970 GO:0000981|GO:0006355
Eupl03g00893 265 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 244 - -
Eupl03g00893 265 ProSiteProfiles 'Homeobox' domain profile. 116 176 IPR001356 GO:0003677
Eupl03g00893 265 FunFam Homeobox-leucine zipper protein 18 104 181 - -
Eupl03g00893 265 Coils Coil 175 212 - -
Eupl03g00893 265 MobiDBLite consensus disorder prediction 92 121 - -
Eupl03g00893 265 SUPERFAMILY Homeodomain-like 119 184 IPR009057 -
Eupl03g00893 265 Pfam Homeodomain 120 174 IPR001356 GO:0003677
Eupl03g00893 265 CDD homeodomain 120 177 IPR001356 GO:0003677
Eupl03g00893 265 Pfam Homeobox associated leucine zipper 176 210 IPR003106 GO:0006355|GO:0043565
Eupl03g00893 265 MobiDBLite consensus disorder prediction 77 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00893 Eupl-Chr3 31456130 31457285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00893 1 265 Homeobox Transcription Factor Family AT4G37790 57.045 1.10e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl03g00893 Homeodomain 9.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00893 K09338 - nnu:104589130 357.451