Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00862 ATGGTTTTTGATTTGGATCCTGATTCTTTTGCTGATATACTTTGTGAGCCTGCCAGCAGTAATGCTCGGGCTGGCACCAAGTTCCAGCCCAAGGCCAAACCCCGGCCCAAAAAGGAAACAACTGTCTCCAGTCTCATCAATGCTGCAAAAGAGAAGCCAGTCACAACAGCCTCCAGTCCCAGAGACACTTCACAATCTGTTTTTCCTTCTCTGGGTCTTGCAGAGAAGGGATGGACTCGTCCACCCCTGTCTTGTGTAGATTCATCCACCATAATGCCATGTAGTGCATCCAAACTACTTGAGACTCAAGAAGCAATTGATAGCAACGAGGTTTTGCATCCAAGACTTTCCCAATCTGATGGCGATAGGAACTCTGCACCAGTGGTTGCTACGCCCCAACTTGCTGTGACCAAAGAGGATGTGGGCTCCACAGACACTCCGCATTCAGAAGTTACAATCTCTGACATTCATGGAGATTTACAGACTGCAGATATTTTTTCCGAGTTGGAATCTCTTGACGATATTCTTTCTCAATCCACCACTGCAAATTTGAGGACTATGAGAAAATTCCAGCCCAGGGTCGAATTGAATGCCCGACCTAGAAACAAGCTCCCTACATTACATCTTGTTACCACTGATGCGGAGGGTTCCATTCCTCATTCTGAGTCTCCTAATCTCCATGCTTCTAATAATAAGGACATTGAGGAAGGACCTAGCTTTCCAATTCTTTCTTCTGTCAATTCAACCTTCAGGGCATGTAGCTCTGTTCCAACTGACACTTCGCCGGAACTTCTTGTGTCCCAAGAGCCAGTACATAGTAGGGAGGCTACAGTTTCTGATAGCAATGAATATTTGCGGATGGATAATGGAAGGTCAGGAAGAGAGGAAGCAGAAGCATTTCCTGGCTTGGAATCTCATGATATTATTTCTGAGGCCACCACTACAACTGGGGATGCTCAGTTTACTCCCTCTGAAACTGAATACTTGGATGGTGACTCGACTCCTGTGTTTCCACCAGATGGTTGTCTGGATTTGTCAACTATGAGGCTCTGTGATTCTGCACCCATAGACCCTCCCTCCGAGCTTCCGGTGACTGAAGAGTTAACACACATTGGTGTTGCTTCTGGCTTAGATGCCACCATTCCTGACAAAGTTGCGGATTCAGAGGCAATTCCTGTAATGTCAGAAAAGAAGGTTATGCATTTCAATTTCTGTGGCCTGTTGTTTATTTATTTGTGGAAATTGAACGAACCATACAGATTTTATATTAATCTTATCGTATCACTTTCCTGTACTGTTAATTGGGTTTCTCAGACTACTAAGAGTAGGAAAAGAAAAACATCAATAGCCTCAGGAGATACAGCGAGAATGGTTCATTCTGGGAATGCTGAAGGACTTTCTCAAGGGATCGAGGATGAAACACCTGTATTAGCAACTGGTATGGTGAATGAAATTGGTAAATCATCAAGGCAGTTGAGAAAGAGGTTAGCTGCTCGTGATCCTGCTGACGAGACGGAAGATGGGAGACAAGAAAATGGGGACCTGCTTGCTGAAATCTCCAACAATTCTCTCATGGATGAAGATGACAACAATGATGATGATGATGACTATAGAGGAGAAGAGACATCCCACCGTAAGAGAGCACCAAGACGATACAAGAGGTCCTTGGCTGAAAATGAGGGAACAGTTCAAAGGCGTAAAAAAACATCTGAAGGATCTGAGCCATTAAACAAGAAACCCCTGAAAAAGAAGTTCTCTCATACTAGTCGACGAAACAAAAGACAAGTGGACAAGATTTTGCTTGAGGTCCCAGAGGATGAAATTAATCCCCAAAAGTTGATGATTAAGGATCTAATCATGCTTGCAGAGGCCAAGGAGCGGATATCGAATAAAGATGCAATGGCTTCGAAGAAGTCTTTTCCCAGTCAAAGTGTTAATAATTCTTTTGCCCAGGATACCCCTTATGATGAAGATGACCCCTATGCTTCGAGGGAAGGTCTAAACCCTGGTGATGATGAAGCTACTCCAGAGGTTCAACCAAGTTCCTCTAAACTGAATTACCACTCCTTCATGGATAGAACACCTACGGAAAGATGGTCGAAACAAGATACAGAATTGTTCTATGAGGCTATTCGGCAGTTTGGGACAGATTTTGCAATGATACAACAATTATTCCCTGGTCGAACACGTCATCAAGTGAAACTGAAATATAAAAAGGAAGAACGCCAACATCCTTTGAAGCTTTCTGATGCTCTGACTAATCGTTCCAAGGATCATTCCCATTTTGAACTGGTGATTGAACGGCTACAACAAGCTACTGCTCAGGCAGAGGAAAATAACAGAGACGTGGAGTCAGCTGGTGTGACTGGTGAGGAGGAGGAGATCACTCCCGAAACAAATGAAGAAGTAACGAAGATGGAGCAGGAGGAAGTAGCAGCTAAAGATTCGGAAGTAGAGGTTCCTGAAGTTCATAGTCCTGTCAAGTCTCCTGAAAGTGAAGATGATGTCTATAGATGGAGTCAATATAAAAGTGATTATGACGTATTCTGA 2550 0.4376 MVFDLDPDSFADILCEPASSNARAGTKFQPKAKPRPKKETTVSSLINAAKEKPVTTASSPRDTSQSVFPSLGLAEKGWTRPPLSCVDSSTIMPCSASKLLETQEAIDSNEVLHPRLSQSDGDRNSAPVVATPQLAVTKEDVGSTDTPHSEVTISDIHGDLQTADIFSELESLDDILSQSTTANLRTMRKFQPRVELNARPRNKLPTLHLVTTDAEGSIPHSESPNLHASNNKDIEEGPSFPILSSVNSTFRACSSVPTDTSPELLVSQEPVHSREATVSDSNEYLRMDNGRSGREEAEAFPGLESHDIISEATTTTGDAQFTPSETEYLDGDSTPVFPPDGCLDLSTMRLCDSAPIDPPSELPVTEELTHIGVASGLDATIPDKVADSEAIPVMSEKKVMHFNFCGLLFIYLWKLNEPYRFYINLIVSLSCTVNWVSQTTKSRKRKTSIASGDTARMVHSGNAEGLSQGIEDETPVLATGMVNEIGKSSRQLRKRLAARDPADETEDGRQENGDLLAEISNNSLMDEDDNNDDDDDYRGEETSHRKRAPRRYKRSLAENEGTVQRRKKTSEGSEPLNKKPLKKKFSHTSRRNKRQVDKILLEVPEDEINPQKLMIKDLIMLAEAKERISNKDAMASKKSFPSQSVNNSFAQDTPYDEDDPYASREGLNPGDDEATPEVQPSSSKLNYHSFMDRTPTERWSKQDTELFYEAIRQFGTDFAMIQQLFPGRTRHQVKLKYKKEERQHPLKLSDALTNRSKDHSHFELVIERLQQATAQAEENNRDVESAGVTGEEEEITPETNEEVTKMEQEEVAAKDSEVEVPEVHSPVKSPESEDDVYRWSQYKSDYDVF* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00862 849 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 23 846 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 773 836 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 488 593 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 635 653 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 799 836 - -
Eupl03g00862 849 CDD SANT 698 739 IPR001005 -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 21 67 - -
Eupl03g00862 849 Pfam Myb DNA-binding like 689 773 IPR039467 -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 442 474 - -
Eupl03g00862 849 FunFam Predicted protein 699 778 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 287 302 - -
Eupl03g00862 849 Gene3D - 699 763 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 215 240 - -
Eupl03g00862 849 SUPERFAMILY Homeodomain-like 697 746 IPR009057 -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 252 305 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 553 581 - -
Eupl03g00862 849 SMART sant 695 743 IPR001005 -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 633 688 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 488 513 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 216 232 - -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 40 67 - -
Eupl03g00862 849 ProSiteProfiles SANT domain profile. 694 742 IPR017884 -
Eupl03g00862 849 MobiDBLite consensus disorder prediction 252 286 - -
Eupl03g00862 849 Coils Coil 766 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00862 Eupl-Chr3 30953385 30964320 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl03g00862 Myb_DNA-bind_7 1.1e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00862 K15198 - nnu:104609943 626.706