Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00859 ATGACACATCGGCAGCTCTTGCTCTTCTCTTTCCTATTCGTTATCCTTCTTTTCCCGGTGAGTTCTCTTACAAATGATGCCGGGATCTTACTTCAAACCAAGAAAGCTCACCTTCAAGACCCCGCCGGCAGCCTCAACGATTGGATTCCGTCGGCTAGCGATCCCTGTAACTGGACCGGCATTGCTTGCGATTCCCAGACACTTGCCGTTAATTCTATTGATCTCACCGGTTTCGAAATTTCCGGAAGTTTTCCGGCTGGTTTTTGCCGGATTCCAACTCTCCAGAACCTCTCCCTAGCTAATAATTATTTCAACGGGAGTGTTTCTTCTGAAGCGATCTCTTCCTGCTCTCATCTTCTCTACTTGAATCTCTCTATCAACTTGTTCGTTGGAGGATTGCCTGAGTTCACGCCGGAGTTTGCTAACTTGCGATGGTTGGATTTCTCGCAGAACAACTTCTCTGGCGAGATTCCAACGAGTTTTGGCCGGTTTCCGAAGCTTCAAGTGCTCAGTCTCTTCGGGAACCTTCTCAATGGCACGATTCCGTCGTTCTTAATGAATCTCACTGAGTTGGTTAGGTTCGAACTCGCTTACAATCCTTTTACGCCAGCTCCCTTGCCGTTGGAGATCGGAAACCTGACTAAGCTTGAGAATCTCTGGCTTCCGTTCTCGAACCTCGTTGGAGACATCCCAGAGTCAGTTGGGCGGCTTGTGGCGCTCAAGAACATCGATCTGTCGAACAATGATCTGTCCGGCAAGATTCCTGATACTATTGGACAGTTGAGGAGCATCGATCAGATTGAGCTCTACTGGAATCGTATCTCCGGTGAATTGCCAGAGAGTCTTGGGAATCTGACGACTCTGCGTTATTTCGATGCGTCTCAGAACAATCTTACCGGAAAATTGCCCGAGAAGTTCAACCGATTGCAACTTATTTCGCTCGGCCTTAACGACAATCATCTGGAAGGTGAGATTCCGGCAATTATCGCTTCAAATCCCAACCTTATAGAGTTGAGGCTCTTCAACAACAGCTTTTCCGGCACTTTACCGGTAGATTTTGGCCGGAATTCCGATCTGGAAAATTTCGATGTATCGAGTAACCGTTTAACAGGTAAGCTTCCTCCTTTCCTCTGTTACAGAAAGAAGCTCAAAAGTCTCGTAGCTTTCAACAACAGATTATCAGGAAATTTGCCAGAATACTACGGAGACTGCAACAGTCTCACTTATGTCAGGATCTTTTACAATGAACTCAGTGGAAAAATACCTATTCGTCTTTGGAGCCTACCCAAGCTTTATTTACTCGAAATAAGAAACAACAGATTCGAAGGCTCGATTCCTCCTGTAATCTCTGGCGCTCGGAATCTGACACAGTTACTGATCTCCGGTAACCAGTTCTCTGGCGAAATGCCAGCAGAAATCTGTGGATTACAAGCACTTTCAGTCATGGACGCAAGTGGAAACCAGTTTTCCGGCGAGCTTCCGGCATGCATAACTGAAATGAAGAAATTGGAAAAGCTCGATCTTCAACAGAACATGTTCTCCGGACAGATTCCCAGCAGAGTAAGCTCGTGGACTGATTTAACGGAGCTGAACCTTTCGAGAAACAGATTTTCCGGCGAGATCCCAACCGAGCTTGGGAGCTTACCAGTTCTAACGTATCTCGATCTCTCTGAAAACTCACTTTCCGGCGAGATTCCGAGGGAACTGACCAACCTGAAGCTCAACAATTTCAATCTCTCCGGCAACAATCTCGCCGGAAAAATCCCCCTCGGTTTCGATAACAAATTTTACCTCCCGAGCTTGGTTGGAAACCCTAATCTCTGTAGTCCAGACCTGAAACCTTTTCCTCCATGTCCGAGAACCAAAAACATCACCTGGTTTCTGATAGCGGTTTTCGTTATCTTGGCTTTACTACTTTTGTTATCACTTTTGTGGTTTTACAACAGCAAAACCAAGATAATTGGCGGGAAAGCGAAACCTCTATGGAAGTTGACGCCATTCCACCGAGTGGGCTTTAACGAAGAGGAAATATTTGCGTCCTTAAAAGATGAGAACCTGATCGGAACCGGCGGGTCCGGTAAAGTTTACCGGGCGAGACTCAAAACCGGTCAGACCGTGGCAGTCAAGAGGCTCTGGGGTGGTCACGGGAAACCGGAAACCGAAAGGGTTTTCCAGTCAGAGGTGGAGACTTTAGGGAGGATCAGGCATGGCAATATCGTAAAATTGTTTTTTAGTTGTGCGGGCGAAGATTTTAGGGTTTTGGTTTACGAGTACATGGTGAATGGGAGCTTGGGGGAGGTTTTGCATGGAGAGAAGGGCGGGGTTTTGTTGGATTGGGGTAAGAGGTTTACTATAGCAGTTGGGGCGGCCCAGGGACTGGCGTATCTCCATCACTACTGCGTGCCTGCTATTGTGCACAGGGATGTGAAATCGAACAATATTTTGTTGGACGAGGAGTTCTTTCCTCGTGTTGCTGATTTTGGGCTGGCGAGGACGTTGCAACGTGATGGTGGCAAGGGCGAATGCGTCATGTCACGGGTTGCTGGTTCTTATGGCTACATTGCGCCGGAGTATGGATACACGCTGAGAGTGACAGAGAAGAGCGATGTCTACAGCTTTGGGGTTGTGTTGATGGAACTCGTGACGGGTAAGACACCGATTGATTCGTCATTTGGGGAGAACAAGGACATAGTGAAGTGGGTGACTGATGCTGCCATAGCCTCTGAAGAACTAGGAAGTGGTGGCAGATGCTCGAATTTGCGACATCTTATGGATCCCAGGATGAACCCATCTTCTTGTGATTATGAAGAGATGGAGAAGGTATTGAATGTGGCTCTTCTTTGTACTTCTGCCTTCCCCTTGAACCGACCCTCCATGAGAAAGGTAGTTGAAATGCTTAAGGACAACAGAGATGTTAGTTTCCCAGCAATGCCTCATCCAAAATGA 2946 0.4728 MTHRQLLLFSFLFVILLFPVSSLTNDAGILLQTKKAHLQDPAGSLNDWIPSASDPCNWTGIACDSQTLAVNSIDLTGFEISGSFPAGFCRIPTLQNLSLANNYFNGSVSSEAISSCSHLLYLNLSINLFVGGLPEFTPEFANLRWLDFSQNNFSGEIPTSFGRFPKLQVLSLFGNLLNGTIPSFLMNLTELVRFELAYNPFTPAPLPLEIGNLTKLENLWLPFSNLVGDIPESVGRLVALKNIDLSNNDLSGKIPDTIGQLRSIDQIELYWNRISGELPESLGNLTTLRYFDASQNNLTGKLPEKFNRLQLISLGLNDNHLEGEIPAIIASNPNLIELRLFNNSFSGTLPVDFGRNSDLENFDVSSNRLTGKLPPFLCYRKKLKSLVAFNNRLSGNLPEYYGDCNSLTYVRIFYNELSGKIPIRLWSLPKLYLLEIRNNRFEGSIPPVISGARNLTQLLISGNQFSGEMPAEICGLQALSVMDASGNQFSGELPACITEMKKLEKLDLQQNMFSGQIPSRVSSWTDLTELNLSRNRFSGEIPTELGSLPVLTYLDLSENSLSGEIPRELTNLKLNNFNLSGNNLAGKIPLGFDNKFYLPSLVGNPNLCSPDLKPFPPCPRTKNITWFLIAVFVILALLLLLSLLWFYNSKTKIIGGKAKPLWKLTPFHRVGFNEEEIFASLKDENLIGTGGSGKVYRARLKTGQTVAVKRLWGGHGKPETERVFQSEVETLGRIRHGNIVKLFFSCAGEDFRVLVYEYMVNGSLGEVLHGEKGGVLLDWGKRFTIAVGAAQGLAYLHHYCVPAIVHRDVKSNNILLDEEFFPRVADFGLARTLQRDGGKGECVMSRVAGSYGYIAPEYGYTLRVTEKSDVYSFGVVLMELVTGKTPIDSSFGENKDIVKWVTDAAIASEELGSGGRCSNLRHLMDPRMNPSSCDYEEMEKVLNVALLCTSAFPLNRPSMRKVVEMLKDNRDVSFPAMPHPK* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00859 981 Gene3D Phosphorylase Kinase; domain 1 664 758 - -
Eupl03g00859 981 FunFam Receptor-like protein kinase HSL1 310 614 - -
Eupl03g00859 981 Gene3D Ribonuclease Inhibitor 205 306 IPR032675 -
Eupl03g00859 981 FunFam receptor protein-tyrosine kinase CEPR1 664 758 - -
Eupl03g00859 981 ProSiteProfiles Protein kinase domain profile. 681 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00859 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 188 - -
Eupl03g00859 981 FunFam Leucine-rich receptor-like protein kinase family protein 206 304 - -
Eupl03g00859 981 SUPERFAMILY L domain-like 72 130 - -
Eupl03g00859 981 Gene3D Transferase(Phosphotransferase) domain 1 759 974 - -
Eupl03g00859 981 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 759 977 - -
Eupl03g00859 981 SUPERFAMILY Protein kinase-like (PK-like) 675 966 IPR011009 -
Eupl03g00859 981 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Eupl03g00859 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Eupl03g00859 981 Gene3D Ribonuclease Inhibitor 307 625 IPR032675 -
Eupl03g00859 981 SMART serkin_6 681 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00859 981 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 193 968 - -
Eupl03g00859 981 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Eupl03g00859 981 Pfam Protein kinase domain 683 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00859 981 Gene3D Ribonuclease Inhibitor 22 204 IPR032675 -
Eupl03g00859 981 SUPERFAMILY RNI-like 146 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00859 Eupl-Chr3 30938016 30942580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00859 26 972 Receptor kinase-like Gene Family AT5G65710 57.084 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl03g00859 Pkinase 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00859 - - psom:113291122 1335.47