Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00858 ATGACTCACCGGGTACTATTAATTCGCCTCCTATTCTTTCTCTTTTTTCTGTGTCGGTTCTCTCGTTCCAGATCCGACGAGTTTCAGATTTTACTGAAATTGAAGGCCGCTCTTCAGAAATCTAATACTAATGTATTTGATTCATGGAGATCGGGTATTTCACCCTGCGATTTCGAAGGAATTTTCTGCAATCCTAACCAATCGGTGACGCGAATTGAACTGCCTCAAAACCGATTGGTCGGAATTCTTCCTCTTGATTCTATCTGCAAGCTTCAATCACTGGAGAGTCTAAATCTCGGTTCAAATTTCCTGTACGGGCCTATTACAGAGGATTTGAAGAACTGTACTAAGTTGCAATACTTAGATCTGTCTAGGAATTCTTTCGCTGGAACGGTGCCTGATTTGTCCTTTCTCAGCGGATTAAAGGTCTTAAATTTGAATCATAGCGGATTTTCTGGTCTTTTTCCTTGGAGATCGCTCGAAAACATGACCAATCTCGTTCTCTTGAGTCTCGGAGACAATCCATTCGACAAAAATCCGTTCCCGGTGGAGGTTTTGAAGCTCAATAAGGTTTACTGGCTTTATCTCTCGAATTGCAGTATCGAAGGACAAATTCCGGTGGGGATTGGAAATCTGACGGAGCTGATTAACCTAGAGCTCTCCCATAATTCTCTATCTGGTGAGATTCCGCCGGACATAGTGAAACTTCGGAAGCTCTGGCAGCTTGAGCTCTATGAGAATCACCTCACTGGAAAACTCCCCGTAGGATTTGGAAACCTCACTAGCCTCGCGTGGTTCGATGCTTCAACTAACAATCTCGAAGGAGATCTCTCCGAGCTGAAGTCCTTGACGCAGCTCGTCTCTCTGCAACTTTTAGAGAATCACTTATCGGGTGAGATTCCGAAGGAGTTTGGGGATTTTAAGTATCTCGTGAATCTCTCCCTATATACAAACAAGCTTACGGGTACTCTACCTCAAAAGCTCGGATCTTGGGCGGATTTCAACTTCATCGACGTCTCTGAGAATTCTTTAACAGGTACGATTCCGCCGGAGATGTGCAAGAACGGAAAGATGAAGCGTTTACTCATGCAACAAAACAAGTTCACAGGAGAAATTCCGGCGAACTACGCGAATTGTTCATCTCTGGTTCGTCTCCGAGTAAATATTAACTCGCTTTCCGGCACCATTCCAGCCGGAATTTGGGGATTGCCGAACGTCAACATCATCGATCTCGCTATGAACGAATTTGAAGGTCCTTTGACGTCTGACATCGGGAACGCAAAGTCGCTCGACCAATTACGCATCGAAAGCAATCGATTTTCCGGAGAATTACCGTGGGAAATCTCAAAAGCTTCTTCTCTTGTTTCAATTAGCTTGAGCTCTAATCAATTTTTTGGAGAAATTCCGATGAGTATTGGAGAATTAAAGATGCTCAATAGTCTCTATTTACAGGAAAACTTGTTTTCCGGCAGCATACCCGACTCGTTAGGCTCATGTACTTCTCTCGACAACATAAACTTCGCCAGAAATTCACTCTCCGGTCAAATTCCGGCCACTCTGGGTTCCTTAACCACTCTCAATTCCTTAAACCTATCGGGAAACCAACTTTCCGGTAAGATTCCGGAGAGTTTATCTTATCTGAAACTCAGCCTTCTCGATCTATCGAACAACCGATTAACCGGTCGTATACCGCAATCTCTTTCTAGAGAAGCGTCTAACGGTAACTTCGCCGGAAATCCCGGCCTATGTAGTCCAGACATTCAGTACTTCCGGCAGTGTTCGTCAGATTCCGGCAAGGCAAGCCGGCTTCGGATCTTTATATCTTGCTTCCTCACAGGAACAACCATCCTGCTTGTGTCGATCGGGTGCTTCGCTCTCGTTAAGAAGAGACAGAAGGATCAGGACCGTTCGTTGAGGGCAGATTCTTGGGACCTAAAATCGTTTCGTACATTGAGTTTCACAGAGCAAGAAATATTGAAATCGATTAAACAGGAGAATTTAATAGGGCATGGCGGTTCTGGAAATGTTTATAAAGTTGCTCTAGAGAGCGAGAAAGAACTCGCCGTGAAACACATCTGGAACTCAAATTCCGGCAGTCAGAGAAGTAGCCGGAGCAGTACGGCGATGCTAATGAAGCAGTCAGGGAACTTGCCGGAATTTGACGCGGAGGTCGCGACGCTGAGCTCGATACGGCACGTGAACGTGGTGAAGCTGTACTGCAGCATCACGAACGAGGATTCGAGTCTGTTGGTTTACGAGTACCTTCCAAACGGAAGCTTGTGGGACCGGCTACACACGTGTCCGACGATGGAGCTTGATTGGGAAACAAGATATGAGATCGCGGTGGGGGCTGCGAAGGGGCTGGATTATCTGCATCACGGGTGCGAGAGGCCGGTGATACACCGGGACGTGAAGTCAAGTAACATATTATTGGACGAGTTCCTTAAGCCACGGATCGCCGATTTCGGGTTATCGAAGATCGTCCACGCAAGTGGAGGAACGGAATCTACGCATGTCATTGCTGGAACGCACGGCTATATAGCGCCTGAATATGCGTACACTAGCAGAGTGACTGAGAAGAGCGATGTGTACAGTTTTGGGGTGGTATTGATGGAGCTAGTGACTGGAAAAAGGCCGATGGAGCCGGAATTTGGAGAGAACAAGGACATAGTGTACTGGGTATGCAGTAAAACGAGGAGCAGGGAGAGTATTCTGGAAGCTGTGGACTCGACTTGCTCTCTTCCTCTCCTAATCCTCCCCCTCTGCAACTACCAAACACACCACCCTAGCCCTCAATTTCTTCTACCTCTAATGGGTACTCTCCAATCCTTTCTCTTCCTAATTCTCATGTTATTTCTTTCTCTTTTCAGCCTCTCCTCCCAAGCCACCATGGATAACCAATCCCATTTCTTCACTCTCATGAAACAGTCACTCTCAGGCGACTCTTTGTCGCGCTGGAACGTCCTCGTGGACGGTGAAAATTCTTACTGTAACTACACTGGAATTGGCTGTGACGATCGCGGGTATGTTGTTAAGATTGATCTCTCTGCATGGTCAGTCACCGGCTATTTTCCGGCCGACGTTTGCTCTTATCTACCAGAATTGCGTATTCTTCGACTTGGCCGCAATAAACTTCATGGCAATTTTCCGACTGGCATCATCAACTGCTCTTTCTTGGAAGAGCTTAATATGACCTCACTGTATCTCACTGGGACACTGCCGAATTTCTCACCGATGAAATCTCTCCGTCTGCTTGACATGTCGTATAACTGCTTCACCGGCGAGTTCCCGGTGTCTGTAACTAACCTCACCAATCTTGAGGTGCTGAATTTCAATGAAAACGGCGGTTTCACATTGTGGCAGTTGCCGGAGGAGATCTCTAGGCTGACAAAGCTCAAATCTATGGTTTTGTCGACGTGCATGATGCATGGTCGAATACCGGCATCGATTGGAAACATGACTTCACTTGTCGACCTCGAATTGCCTGGAAATTTCTTGATGGGCCCGATTCCGGTGGAAATTGGTAAGCTGAAGAACTTGCAACAGCTTGAATTATACTATAACTACCAAATCAGTGGTGATATACCAGATGAACTCGGAAATCTTACTCAGCTCATTGATTTGGACATGTCCGTCAATCGACTGACTGGAAAGATACCGGAATCTCTGTGTAAGCTTCCGAATCTTCGCGTCCTGCAGATGTACAACAACAGTCTCACTGGAGAAATCCCAAGCGTGATTGGGAACTCGACAACTTTGTACATATTATCACTCTATGACAATTCTCTCACTGGCAAAGTGCCACCAAATCTCGGGGCGTCATCGGAGTTGATTGCTTTGGACTTGTCGGAAAACAGTCTATCGGGGGAGTTGCCCCCGGATGTTTGCAAGGGAGGTAAATTGTTGTATTTCTGTGTGCTGCAAAATCAGTTTTCTGGTGTGTTGCCTGAGAATTATGCAAAATGCGAGTCTCTCCTTCGATTTCGAGTTAGTAATAACCGTTTAGGGGGTTCCATCCCTCAAGGCCTTCTGGGTCTTCCCCATGTTTCAATTATTGATTTGAGTTCCAATAGTTTCAATGGTCCAATTGCGGAAACGATTGGAAATGCTAAGAACATATCAGAGCTGTTCATTCAGAACAACAGTATTTCAGGTGTTCTACCACGTGAAATCTCTCAAGCTGGTAATCTGGTGAAGATCGATCTCAGTAACAATCTCCTATCCGGTCCCATTCCTCCTGAAATTGGAAACCTAAGAAAGCTGAATTTATTGATGTTGCAAGGCAACAAGCTAAATTCATCCATCCCCAAGTCTCTTTCTTCCTTGAAATCTCTCAATGTTCTTGATCTCTCCAACAACCTCTTAACAGGTAGTATACCGGAGAGCATCTGTGAATTGCTGCCCAATTCAATCAACTTTTCAAACAATCGCCTCTCGGGTCCAATTCCTCTCTCACTGATTAAAGGAGGATTGGTAGAAAGTCTTTCAGGCAATCCAAGTCTCTGTGTTTCAGTTTATCTTAACTCATCAGATTCCAATTTCCCTGTCTGTCCACAAATTTTTAGCCGAAAGAGGCTAAACCATGTCTGGGTGATTGGGATTTCAGTGGCAATTGTGATTGTTGGACTTGTGTTATTTCTAAAACGTTGGTTAATTGGAGAGAGGTCAGCAATGGAACAGGATGAAACTTCGTCTTCGTCGTCCTTCTATTACGACATCAAGAGCTTCCATAAGATCACTTTTGATCAGCGTGAGATAGTCGATGCTCTAGTTGAAAAGAATATTGTGGGGCACGGGGGATCTGGGACTGTGTACAAGATCGAATTGAGTAATGGAGAATCGGTTGCAGTGAAGAAGCTATGGACTCGAAAGATGAAGGATCCAGCCTCCGAGGATCAATTGTTCTGGGATAAGGAGCTGAAGACCGAGGTCCAGACTCTTGGGAGCATCAGGCACAAGAACATAGTCAAGTTGTACAGCTACTTTTCGAGTTCAGATTCAAATCTGTTGGTTTACGAATACATGCCAAATGGAAACCTGTGGGATGCTCTTCACAGAGGTAGGACCCTATTGGATTGGCCCACCAGACATAAAATTGCAGTTGGGGTTGCACAGGGTCTGGCCTACCTCCACCATGATCTGTTGCCGTCGATCATTCACAGAGATATCAAGTCGACCAATATCCTCCTCAATGCAGAATACCAGCCTAAGGTCGCAGATTTCGGCATTGCAAAGGTCTTGAAAGCAAGAGGAGGAAAGGACTCCACCACTACTGTTATTGCAGGGACTTATGGATACTTGGCCCCAGAGTATGCTTATACGTCGAAGGCAACGACAAAGTGTGATGTGTACAGCTTTGGGGTAGTACTCATGGAACTGATAACTGGGAAGAAGCCAGTAGAGTCGGAGTTCGGAGAGAACAAGAACATTATTTACTGGGTGAAATGCAAGGTGGAGACTAAGGAAGGTGTTACAGAGGTCTTAGACAACCGATTATCGGGGTCGTTCAGGGAAGAGATGAAAAAGGTGCTTCGGATTGCTATAAGTTGCACTTATAGCATCCCAGCCCATCGTCCAACCATGAATGAGGTTGTGCAGTTGCTGATTGAGGCTGACCCATGCAGATTCGATTCTTGCAAGTCGTCAAACAAGATCAAAGAAGCATCAAACATCATTAAGACTAAGGACCCATCTGAATTATAA 5703 0.4557 MTHRVLLIRLLFFLFFLCRFSRSRSDEFQILLKLKAALQKSNTNVFDSWRSGISPCDFEGIFCNPNQSVTRIELPQNRLVGILPLDSICKLQSLESLNLGSNFLYGPITEDLKNCTKLQYLDLSRNSFAGTVPDLSFLSGLKVLNLNHSGFSGLFPWRSLENMTNLVLLSLGDNPFDKNPFPVEVLKLNKVYWLYLSNCSIEGQIPVGIGNLTELINLELSHNSLSGEIPPDIVKLRKLWQLELYENHLTGKLPVGFGNLTSLAWFDASTNNLEGDLSELKSLTQLVSLQLLENHLSGEIPKEFGDFKYLVNLSLYTNKLTGTLPQKLGSWADFNFIDVSENSLTGTIPPEMCKNGKMKRLLMQQNKFTGEIPANYANCSSLVRLRVNINSLSGTIPAGIWGLPNVNIIDLAMNEFEGPLTSDIGNAKSLDQLRIESNRFSGELPWEISKASSLVSISLSSNQFFGEIPMSIGELKMLNSLYLQENLFSGSIPDSLGSCTSLDNINFARNSLSGQIPATLGSLTTLNSLNLSGNQLSGKIPESLSYLKLSLLDLSNNRLTGRIPQSLSREASNGNFAGNPGLCSPDIQYFRQCSSDSGKASRLRIFISCFLTGTTILLVSIGCFALVKKRQKDQDRSLRADSWDLKSFRTLSFTEQEILKSIKQENLIGHGGSGNVYKVALESEKELAVKHIWNSNSGSQRSSRSSTAMLMKQSGNLPEFDAEVATLSSIRHVNVVKLYCSITNEDSSLLVYEYLPNGSLWDRLHTCPTMELDWETRYEIAVGAAKGLDYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLSKIVHASGGTESTHVIAGTHGYIAPEYAYTSRVTEKSDVYSFGVVLMELVTGKRPMEPEFGENKDIVYWVCSKTRSRESILEAVDSTCSLPLLILPLCNYQTHHPSPQFLLPLMGTLQSFLFLILMLFLSLFSLSSQATMDNQSHFFTLMKQSLSGDSLSRWNVLVDGENSYCNYTGIGCDDRGYVVKIDLSAWSVTGYFPADVCSYLPELRILRLGRNKLHGNFPTGIINCSFLEELNMTSLYLTGTLPNFSPMKSLRLLDMSYNCFTGEFPVSVTNLTNLEVLNFNENGGFTLWQLPEEISRLTKLKSMVLSTCMMHGRIPASIGNMTSLVDLELPGNFLMGPIPVEIGKLKNLQQLELYYNYQISGDIPDELGNLTQLIDLDMSVNRLTGKIPESLCKLPNLRVLQMYNNSLTGEIPSVIGNSTTLYILSLYDNSLTGKVPPNLGASSELIALDLSENSLSGELPPDVCKGGKLLYFCVLQNQFSGVLPENYAKCESLLRFRVSNNRLGGSIPQGLLGLPHVSIIDLSSNSFNGPIAETIGNAKNISELFIQNNSISGVLPREISQAGNLVKIDLSNNLLSGPIPPEIGNLRKLNLLMLQGNKLNSSIPKSLSSLKSLNVLDLSNNLLTGSIPESICELLPNSINFSNNRLSGPIPLSLIKGGLVESLSGNPSLCVSVYLNSSDSNFPVCPQIFSRKRLNHVWVIGISVAIVIVGLVLFLKRWLIGERSAMEQDETSSSSSFYYDIKSFHKITFDQREIVDALVEKNIVGHGGSGTVYKIELSNGESVAVKKLWTRKMKDPASEDQLFWDKELKTEVQTLGSIRHKNIVKLYSYFSSSDSNLLVYEYMPNGNLWDALHRGRTLLDWPTRHKIAVGVAQGLAYLHHDLLPSIIHRDIKSTNILLNAEYQPKVADFGIAKVLKARGGKDSTTTVIAGTYGYLAPEYAYTSKATTKCDVYSFGVVLMELITGKKPVESEFGENKNIIYWVKCKVETKEGVTEVLDNRLSGSFREEMKKVLRIAISCTYSIPAHRPTMNEVVQLLIEADPCRFDSCKSSNKIKEASNIIKTKDPSEL* 1901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00858 1900 SUPERFAMILY L domain-like 52 329 - -
Eupl03g00858 1900 ProSitePatterns Protein kinases ATP-binding region signature. 1596 1619 IPR017441 GO:0005524
Eupl03g00858 1900 Gene3D Transferase(Phosphotransferase) domain 1 1675 1889 - -
Eupl03g00858 1900 Gene3D Transferase(Phosphotransferase) domain 1 755 943 - -
Eupl03g00858 1900 SUPERFAMILY L domain-like 277 593 - -
Eupl03g00858 1900 FunFam Inactive leucine-rich repeat receptor-like protein kinase 377 469 - -
Eupl03g00858 1900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1718 1730 IPR008271 GO:0004672|GO:0006468
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 964 1118 IPR032675 -
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 1119 1219 IPR032675 -
Eupl03g00858 1900 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Eupl03g00858 1900 Pfam Leucine rich repeat N-terminal domain 967 1005 IPR013210 -
Eupl03g00858 1900 SMART serkin_6 662 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00858 1900 SMART serkin_6 1590 1875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00858 1900 ProSiteProfiles Protein kinase domain profile. 1590 1875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 1220 1383 IPR032675 -
Eupl03g00858 1900 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 206 - -
Eupl03g00858 1900 SUPERFAMILY Protein kinase-like (PK-like) 1565 1868 IPR011009 -
Eupl03g00858 1900 FunFam Probable inactive receptor kinase RLK902 24 183 - -
Eupl03g00858 1900 FunFam Leucine-rich receptor-like protein kinase family protein 184 279 - -
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 468 576 IPR032675 -
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 183 278 IPR032675 -
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 1384 1510 IPR032675 -
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 279 373 IPR032675 -
Eupl03g00858 1900 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 755 915 - -
Eupl03g00858 1900 ProSiteProfiles Leucine-rich repeat profile. 117 139 IPR001611 GO:0005515
Eupl03g00858 1900 FunFam receptor protein-tyrosine kinase CEPR1 1573 1674 - -
Eupl03g00858 1900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Eupl03g00858 1900 SMART LRR_typ_2 212 236 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 1275 1298 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 1032 1056 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 1418 1441 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 115 139 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 1103 1129 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 1442 1466 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 475 499 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 1226 1250 IPR003591 -
Eupl03g00858 1900 SMART LRR_typ_2 523 547 IPR003591 -
Eupl03g00858 1900 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 470 590 - -
Eupl03g00858 1900 Gene3D Ribonuclease Inhibitor 374 467 IPR032675 -
Eupl03g00858 1900 SUPERFAMILY RNI-like 1024 1268 - -
Eupl03g00858 1900 FunFam Leucine-rich receptor-like protein kinase family protein 280 376 - -
Eupl03g00858 1900 ProSiteProfiles Leucine-rich repeat profile. 1444 1466 IPR001611 GO:0005515
Eupl03g00858 1900 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
Eupl03g00858 1900 FunFam Leucine-rich repeat receptor-like protein kinase 1119 1222 - -
Eupl03g00858 1900 SUPERFAMILY L domain-like 1191 1508 - -
Eupl03g00858 1900 FunFam Receptor protein-tyrosine kinase CEPR1 1226 1511 - -
Eupl03g00858 1900 FunFam Receptor-like protein kinase HAIKU2 645 754 - -
Eupl03g00858 1900 Gene3D Phosphorylase Kinase; domain 1 645 754 - -
Eupl03g00858 1900 Gene3D Phosphorylase Kinase; domain 1 1573 1674 - -
Eupl03g00858 1900 FunFam leucine-rich repeat receptor-like protein kinase TDR 1675 1879 - -
Eupl03g00858 1900 SUPERFAMILY Protein kinase-like (PK-like) 652 903 IPR011009 -
Eupl03g00858 1900 ProSiteProfiles Protein kinase domain profile. 662 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00858 1900 Pfam Protein kinase domain 1592 1866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00858 1900 Pfam Protein kinase domain 664 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00858 Eupl-Chr3 30872821 30901482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00858 41 913 Receptor kinase-like Gene Family AT5G49660 43.722 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl03g00858 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00858 - - nnu:104607584 1451.42