Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00857 ATGCGATTTCTTCTTCCTCTTCTTCTTCTCCTCCTCGTCTACCTCCTAAATAACCACCAAGTTGCCGGTAAACTTCCTCAAGTACCGGAATACCACTATTTACTCTCCCTGAAAACTGCCATTTCAGACGACCCAGGAGCCTCCCTTCTGAACTGGAACAGCTCCTCAAGCCATTGCACATGGACGGGCGTTTCCTGCGACGCGTACCACCGAGTCGTCTCTCTCGACCTCTCCAACATGAGCCTCTCCGGCATTCTATCTCCCGACGTTGGCCATCTCCGCAACCTCGTAAACCTCACCCTCGCCGCAAACTCTCTTTCTGGCCGGATCCCGTCGGAGATCTCTCACATCTACGGTCTCCGTCTGTTAAACCTCTCGAATAACGTCTTCAACGGTAGCTTCCCTTCCCAGCTCTCTCGTCTCAAGTACTTGCAAGTCCTCGATTTGTATAACAATAACATGACTGGAGTTCTCCCGGTTGAGGTCTCGGAGATGCCGAATCTCCGTCATCTTCACCTTGGCGGGAACTTCTTTTCCGGCCAAATCCCGAAGGAGTACGGCCGGTGGGAGTTTCTTGAGTACTTGGCGGTTTCAGGAAACGAACTTGTCGGTGTTATACCACCGGAGATCGGGAACTTAACAAAGCTCCAACAGCTCTACGTTGGCTACTTCAATACCTATGAAGGCGGTATTCCTGCGGAGATCGGAAACCTGACGGATTTGGTTCGATTGGATATGGCGAACTGTGCATTGACCGGTGAGATTCCGCATGAGATCGGAAAGCTTCAGAACCTGGACACGTTGTTTCTCCAGGTGAATGTGCTTTCTGGAGGGCTTACGCTGGAACTAGGGAAGCTTAAGAGCTTGAAATCCATGGATCTCTCTAACAATATGCTTTCGGGTGAAATTCCAGAAGCATTTTCGGAGCTCAAAAATCTGACGCTTTTAAATCTGTTTCGGAACAAGTTGCACGGTGCGATTCCGGATTTTATCGGCGATTTGCCAGAATTAGAGGTTTTGCAGCTCTGGGAGAACAATTTTACTGGAAGTATTCCCCAAGGACTTGGAAAGAACGGGAAGCTTCAGCTTCTTGATCTGTCGTCTAACAAGCTGACTGGAAATCTCCCGCCAGATCTGTGTTTTGGAAATCAGCTTCAGACTTTGATCGCTTTGGGCAACTTTTTGTTCGGTCCAATTCCTGAATCGCTTGGGAGGTGTGAGTCGCTCACTCGGATTCGAATGGGAGAGAACTTTCTTAATGGTTCGATTCCTAACGGCCTCTTCGGGTTGCCCAAGCTCGTTCAGGTCGAGCTTCAAGATAACTATCTTGCTGGTGGTTTTCCAGAGATGGATTCGACCACTGTGAATCTCGGACAGATTAGTCTGTCCAATAATCGGCTTACGGGGTCTCTCCCACCATCCATTGGGAACTTCTCTGGCGTTCAGAAGCTACTTCTGGATGGGAATTTGTTCTCTGGTAAGATACCGGCGGAGATTGGGAGGTTGCAGCAGCTGTCGAAAATGGATTTTAGTAACAACGGGTTCTCCGGGCTGATTGCGCCGGAGATCAGTGAATGCAAGCTTCTTACCTTCGTTGATCTTAGCAGGAATGAGCTTTCAGGTGAAATACCAGGGGAGATCACTGGTATGAGGATCTTGAATTACCTGAATCTGTCGAGGAATCATCTCATTGGGAGCATTCCTTCGTCAATTTCCACTATGCAGAGCTTGACTTCTGTTGATTTCTCCTACAACAATCTATCTGGTTTGGTTCCGGCGACTGGTCAGTTCAGTTACTTCAATTCAACATCCTTCGTCGGAAACCCTGAACTCTGCGGTCCATACTTGGGGCCTTGCAAGTTTGGGGGTGCCAATAGTACCCACCAACCTCACGTTAAAGGCCCACTCTCTGCTTCGTTAAAGCTCCTCCTTGTAATTGGCCTTCTTGTATGTTCAATTTTATTCGCGGTTGCCGCCATTATCAAAGCCCGATCACTGAAGAAGGCAAATGAGTCCCGCTCCTGGAAGCTGACCGCGTTCCAGCGTCTGGATTTCTCCTGCGACGACGTTTTGGATTGCTTGAAGGAAGATAACATTATCGGGAAAGGAGGCGCTGGGATTGTTTACAAGGGATCAATGCCTAATGGAGATCAAGTTGCTGTGAAAAGGCTTCCAGGAATGAGTCGAGGATCTTCTCACGACCATGGATTCAATGCAGAAATACAGACTCTGGGTAGGATCCGACACCGCCACATTGTGAGATTATTGGGATTCTGTTCGAATCACGAAACAAATCTTCTGGTTTATGAATACATGCCTAATGGGAGCTTGGGTGAGGTTCTTCATGGCAAGAAGGGAGGTCATTTGCACTGGGACACAAGATACAAGATTGCAGTGGAGGCTGCAAAGGGGCTCTGTTATCTCCATCACGACTGTTCACCATTGATCCTCCACCGTGATGTGAAATCAAACAATATCCTTCTTGATTCCAACTTTGAAGCACACGTTGCGGATTTCGGCCTCGCCAAGTTTTTACAGGATTCGGGCACTTCTGAATGCATGTCTGCCATTGCCGGTTCTTACGGATACATTGCTCCAGAGTATGCCTACACACTGAAGGTTGACGAGAAGAGCGATGTTTACAGCTTCGGTGTAGTTCTCTTAGAATTGGTAAGTGGCAGAAAACCTGTTGGGGAATTTGGAGACGGCGTCGACATTGTCCAGTGGGTTCGAAAGACGACTGATTCAAACAAGGAAGGAGTATTGAAGATCCTTGATCCGAGACTCCCATCCGTTCCCCTGCATGAGGTGATGCATGTATTCTATGTTGCAATGCTTTGTGTCGAAGAACAGAGCGTGGAACGCCCCACAATGCGGGAAGTCGTTCAAATCCTAACAGAACTACCAAAGACACCGAACTCGAAAACGGGTGTCTCAACTATCATGGAGTCTTCCCCACCAGCGGTAGCTACCGCCGCAGAAATTGCAACAATAACAACCATTAAAGAAACAAAAGATCAGCAGCAAGGATCACCACCACCTCAGTCACCACCACCACCAACTGATCTCCTTAGCATCTGA 3081 0.4836 MRFLLPLLLLLLVYLLNNHQVAGKLPQVPEYHYLLSLKTAISDDPGASLLNWNSSSSHCTWTGVSCDAYHRVVSLDLSNMSLSGILSPDVGHLRNLVNLTLAANSLSGRIPSEISHIYGLRLLNLSNNVFNGSFPSQLSRLKYLQVLDLYNNNMTGVLPVEVSEMPNLRHLHLGGNFFSGQIPKEYGRWEFLEYLAVSGNELVGVIPPEIGNLTKLQQLYVGYFNTYEGGIPAEIGNLTDLVRLDMANCALTGEIPHEIGKLQNLDTLFLQVNVLSGGLTLELGKLKSLKSMDLSNNMLSGEIPEAFSELKNLTLLNLFRNKLHGAIPDFIGDLPELEVLQLWENNFTGSIPQGLGKNGKLQLLDLSSNKLTGNLPPDLCFGNQLQTLIALGNFLFGPIPESLGRCESLTRIRMGENFLNGSIPNGLFGLPKLVQVELQDNYLAGGFPEMDSTTVNLGQISLSNNRLTGSLPPSIGNFSGVQKLLLDGNLFSGKIPAEIGRLQQLSKMDFSNNGFSGLIAPEISECKLLTFVDLSRNELSGEIPGEITGMRILNYLNLSRNHLIGSIPSSISTMQSLTSVDFSYNNLSGLVPATGQFSYFNSTSFVGNPELCGPYLGPCKFGGANSTHQPHVKGPLSASLKLLLVIGLLVCSILFAVAAIIKARSLKKANESRSWKLTAFQRLDFSCDDVLDCLKEDNIIGKGGAGIVYKGSMPNGDQVAVKRLPGMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKTTDSNKEGVLKILDPRLPSVPLHEVMHVFYVAMLCVEEQSVERPTMREVVQILTELPKTPNSKTGVSTIMESSPPAVATAAEIATITTIKETKDQQQGSPPPQSPPPPTDLLSI* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00857 1026 SUPERFAMILY L domain-like 303 620 - -
Eupl03g00857 1026 SMART serkin_6 694 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00857 1026 Gene3D Ribonuclease Inhibitor 380 620 IPR032675 -
Eupl03g00857 1026 ProSiteProfiles Protein kinase domain profile. 694 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00857 1026 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 225 966 - -
Eupl03g00857 1026 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 663 771 - -
Eupl03g00857 1026 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Eupl03g00857 1026 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 87 330 - -
Eupl03g00857 1026 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Eupl03g00857 1026 Pfam Protein tyrosine and serine/threonine kinase 696 965 IPR001245 GO:0004672|GO:0006468
Eupl03g00857 1026 MobiDBLite consensus disorder prediction 1011 1026 - -
Eupl03g00857 1026 Pfam Leucine Rich Repeat 288 310 IPR001611 GO:0005515
Eupl03g00857 1026 Gene3D Ribonuclease Inhibitor 183 277 IPR032675 -
Eupl03g00857 1026 SUPERFAMILY Protein kinase-like (PK-like) 688 965 IPR011009 -
Eupl03g00857 1026 Gene3D Transferase(Phosphotransferase) domain 1 772 983 - -
Eupl03g00857 1026 MobiDBLite consensus disorder prediction 1002 1026 - -
Eupl03g00857 1026 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 772 981 - -
Eupl03g00857 1026 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 338 623 - -
Eupl03g00857 1026 SUPERFAMILY RNI-like 74 396 - -
Eupl03g00857 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Eupl03g00857 1026 Gene3D Phosphorylase Kinase; domain 1 660 771 - -
Eupl03g00857 1026 SMART LRR_typ_2 574 597 IPR003591 -
Eupl03g00857 1026 SMART LRR_typ_2 238 262 IPR003591 -
Eupl03g00857 1026 SMART LRR_typ_2 93 117 IPR003591 -
Eupl03g00857 1026 SMART LRR_typ_2 334 358 IPR003591 -
Eupl03g00857 1026 SMART LRR_typ_2 286 309 IPR003591 -
Eupl03g00857 1026 SMART LRR_typ_2 165 189 IPR003591 -
Eupl03g00857 1026 SMART LRR_typ_2 359 382 IPR003591 -
Eupl03g00857 1026 Gene3D Ribonuclease Inhibitor 278 379 IPR032675 -
Eupl03g00857 1026 Pfam Leucine rich repeat 120 176 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00857 Eupl-Chr3 30852970 30857297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00857 18 986 Receptor kinase-like Gene Family AT5G65700 79.055 0.0 1541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl03g00857 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00857 - - nnu:104607581 1734.54