Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00831 ATGGAGCTCAATGAACATGGCTTCTTAGAGGAGTTACTAGCTCTAAGAAGAGATACTTGGGAGACTTTCCCTACGGGAATGAATGAGTTCTTCTCTAATGGGTGGAGTTTGGATTGTTTCGACGAGAACCCGGGTGTGGTTTTACCGAGTTCTTCATTTGAAAGATTAGTCATGTCGACCGAACCAGGTATCGATTGTTCTTTGAAAGAAGTCTACTGTCCATTTGGAGATGGATTATCGGTACCTGTGATTGATTCATCGTATCAAAAGCATGATACACCTTCATTTCCAACTCAAGAAGATTACCCATTAATGTTGGAGGATGAACCTGGTCTACTTGGCAATAATGATCTTCACAATTTGGAGGAGAGACAGAATAGTTGTAAAGTGGAGCCAGTCCAAGGTACTGAAATTCCCACGGCCAACATGGATTTGTGTCTAGAGAGAAAAAATCGGGTAAAGAAAGTGGAGGGGCAGCCGTCGAAGAATCTAATGGCGGAGAGACGGAGAAGAAAGCGATTGAATGATCGTCTTTCGATGCTTCGATCAGTCGTTCCTAAGATAAGCAAGATGGATAGAACATCTATACTTGGAGACACCATAGATTACATGAAAGAGCTCCTACAGAGAATCAAGAATTTGCAAGATGAAATTGAAGTGGGTTCAAATCAGTTGAACCTAATGAGCATCTTCAAGGATTTAAAACCAAATGAAATCCTTGTGAGGAATACACCCAAGTTTGATGTCGAAAGGAGGAATGTAGACACCAGAGTCGAGATTTGCTGTGCAGGGAAGCCAGGTTTGTTGCTATCGACTGTAACCACACTTGATGCACTAGGCCTTGAGATTCAACAGTGTGTTATAAGCTGTTTCAATGATTTTGCAATGCAAGCTTCTTGCTCAGAGGAATTGGAGCAAAGAACAATAAGTTCTGAAGAAATAAAGCAAGCATTATTCAGAAACGCAGGTTATGGAGGGAGGTGTCTGTAG 990 0.4172 MELNEHGFLEELLALRRDTWETFPTGMNEFFSNGWSLDCFDENPGVVLPSSSFERLVMSTEPGIDCSLKEVYCPFGDGLSVPVIDSSYQKHDTPSFPTQEDYPLMLEDEPGLLGNNDLHNLEERQNSCKVEPVQGTEIPTANMDLCLERKNRVKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDTIDYMKELLQRIKNLQDEIEVGSNQLNLMSIFKDLKPNEILVRNTPKFDVERRNVDTRVEICCAGKPGLLLSTVTTLDALGLEIQQCVISCFNDFAMQASCSEELEQRTISSEEIKQALFRNAGYGGRCL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00831 329 Coils Coil 197 224 - -
Eupl03g00831 329 Pfam Helix-loop-helix DNA-binding domain 164 207 IPR011598 GO:0046983
Eupl03g00831 329 CDD ACT_UUR-ACR-like 256 318 - -
Eupl03g00831 329 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 129 323 - -
Eupl03g00831 329 SMART finulus 164 213 IPR011598 GO:0046983
Eupl03g00831 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 227 IPR036638 GO:0046983
Eupl03g00831 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Eupl03g00831 329 Gene3D - 149 224 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00831 Eupl-Chr3 30137152 30138959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00831 149 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 67.213 6.23e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl03g00831 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00831 - - nnu:104595568 523.857