Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00828 ATGGAGAACTACTCCTACTCTTCCTACCCTGAATCTGGAGACTCTTCGCCACGATCGCGAGAGATCGACTGCGAGAACCAATCATGGGACGAACCTCCTTCAAACTACAAGGTCAAATTCATGTGCAGCTATGGTGGGAAGATCCATCCTAGACCTCACGATAACCAACTCGCGTACGTCGGAGGTCATACTAAGATCTTGGCGGTCGATCGCAGCATCAGATTCTCTGGCATCATTGGTAAGCTCTCTTCTCTTTGCGACACCGACGTCTGCTTCAAGTATCAGTTACCGGGAGAAGATCTGGACGCTCTGATCTCCGTAACCAACGACGAAGATCTTGAGCACATGATGCTTGAATACGACCGTCTCCACCGCGCCTCAAAGCCAGCAAGACTCCGCCTTTTTCTCTTCCCTCTGAATCCTTCGGCCCCGACGAGCTTTGCTGCCGACGAACCGAAAAACAATCAGCAATGGTTCGTGGATGCTCTGAATTCGGTTCCCATTCAGTCTCTCGATGCATCTTCGCCGCCGGCAGCGCCGACGCAATCCAATCCGGATTTTCTCTTCGGTTTCGATAAAGGACTCGCGCCTCCTCCTCCTCCACCTCCGGCGGTTAAATTGCAAGATCCGACGCCGGAACCGGTTCCGGAAGTATCTCCAACTGAAACTCAGTCCGGATCGGATTCTGGCAGAGAAGATCGGCACATCGGAGGTGAACCGGTTGTTTCTCCGTTGGAGATCCAGAGGCAGATCCAGGATTTTCAAAGATTGCAGATCGCAAGCCATGAACAAGCTATGTTCCAGAGGAAGAGCGACGAAGCCCTGGCCAGAGCTTTCCAGGGAGATTATTACGTACAGAAGGTTCCAGAAAAGACAGTGCCATCGGTAACTCCTGTACCGGTTCCTCCTACGGTTTCAGTTCCGGCACCGTACTGGCAAGATAGACACATGGCGACCGGAGGTTACACGGCAGCGATGGAGCAGCCGATCTATATGATGCCGACACCGGTGGGTGTCTACCAGGCGTCCGCGACAGGACGGCCGGTGACCGGTCAGGTCGGTCAGGGTTACTATGCAATGCAGAGGGTGATGCAAGATGTTTATCGGGAACAGCCCATGTACAGCGTCGGTCCACCACCTCAACAGCAACCACAAACACAGCCGAAGGTGATGGGTGGGTATGGAGAAGGTGTTGGGATGGTAAGGCCGCCAGCGGGTGGTGGAATGGCGATGGCTGAGGCGGGGTATGCGCAGATGGCGTATGATAGTGCGGGGAGGCAGGTGTATTATACTGCTGCGCCAGGAGGGGTGGTGCCCTCTTCATATCAGACGGTGACGGCGGGGGGCGTGGATGTAAGACAAGCGGCGCCTTTGAATGTGAATCAAGAGGGTAAGGTTGTTAAGCCTTCCCAATCTTCTGTGTGA 1425 0.5425 MENYSYSSYPESGDSSPRSREIDCENQSWDEPPSNYKVKFMCSYGGKIHPRPHDNQLAYVGGHTKILAVDRSIRFSGIIGKLSSLCDTDVCFKYQLPGEDLDALISVTNDEDLEHMMLEYDRLHRASKPARLRLFLFPLNPSAPTSFAADEPKNNQQWFVDALNSVPIQSLDASSPPAAPTQSNPDFLFGFDKGLAPPPPPPPAVKLQDPTPEPVPEVSPTETQSGSDSGREDRHIGGEPVVSPLEIQRQIQDFQRLQIASHEQAMFQRKSDEALARAFQGDYYVQKVPEKTVPSVTPVPVPPTVSVPAPYWQDRHMATGGYTAAMEQPIYMMPTPVGVYQASATGRPVTGQVGQGYYAMQRVMQDVYREQPMYSVGPPPQQQPQTQPKVMGGYGEGVGMVRPPAGGGMAMAEAGYAQMAYDSAGRQVYYTAAPGGVVPSSYQTVTAGGVDVRQAAPLNVNQEGKVVKPSQSSV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00828 474 CDD PB1_UP2 41 137 - -
Eupl03g00828 474 Pfam PB1 domain 53 138 IPR000270 GO:0005515
Eupl03g00828 474 SMART PB1_new 52 139 IPR000270 GO:0005515
Eupl03g00828 474 MobiDBLite consensus disorder prediction 1 15 - -
Eupl03g00828 474 Gene3D - 58 138 - -
Eupl03g00828 474 SUPERFAMILY CAD & PB1 domains 53 145 - -
Eupl03g00828 474 MobiDBLite consensus disorder prediction 171 244 - -
Eupl03g00828 474 MobiDBLite consensus disorder prediction 1 28 - -
Eupl03g00828 474 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 57 139 - -
Eupl03g00828 474 PANTHER OS05G0427100 PROTEIN-RELATED 9 379 - -
Eupl03g00828 474 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00828 Eupl-Chr3 30007562 30009927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00828 30 166 MAP Kinase Kinase Kinase AT5G57610 44.604 6.36e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00828 - - ming:122072626 544.273