Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00822 ATGGGGGTTCGTAAGGTTGGGAAATACGAGGTGGGGAGAACTGTTGGTGAGGGGACCTTCGCCAAGGTCAAGTTTGCTCAGAACACCGAGACCGGTGAGAGCGTCGCCATGAAAGTGCTCGATCGCAGCACCATCATCAAGCACAAGATGGTCGAACAGATTAAGAGGGAGATATCAATAATGAAGCTTGTTAGACATCCGTATGTTGTTCGTCTACACGAGGTTCTGGCAAGTCGCACAAAGATATATATAATCTTGGAGTTCATTACAGGCGGTGAATTGTTTGATAAAATAGTTCGCCAAGGACGACTCAGTGAAAATGAATCACGAAGATACTTCCAGCAGCTCATTGATGGGGTGGATTATTGCCACAGTAAGGGAGTCTACCATCGAGATTTGAAGCCTGAAAATCTTCTTCTGGATTCTCAAGGAAATTTAAAAATTTCAGATTTTGGCCTTAGCGCCTTGCCAGATCAGGGGGTTAGCCTCCTTCGTACTACTTGTGGAACTCCAAACTATGTCGCACCAGAGGTACTCAGCCACAAGGGTTACAATGGTGCTGTAGCAGATGTCTGGTCCTGTGGGGTCATCCTTTATGTTTTGATGGCAGGATATCTCCCATTTGATGAGACTGATCTTACCACGCTGTACAGTAAGATTGAGAGAGCGGAGTTTTCCTGCCCATCTTCGTTTCCGGTCGGAGCAAAATCTTTAATTCATAGAATTCTAGACCCGAATCCTGAAACTCGTGTCAGGATCGAAGAGATCAGGAACGATGAGTGGTTTAGGAGGAGTTATGTTCCTGTTAGACTTGTTGAGTATGAGGATGTTAACCTGGATGATGTATATGCTGTTTTTGATGATCCTGAGGACCAGCAGACTGATGAGCAATGTGGTAATGAGGAGATGGGTCCTCTGATTCTAAATGCTTTTGACCTGATAATTCTCTCTCAAGGGCTGAACCTTTCTGCACTGTTTGATCGTGGACAGGTATGTTTACTGTTTATATTTCATTCATTTATGTTTCATATTTGGCTTATTGGACAATTACTCCTAATACCTCTCGAATGTAGACTTTTTATGATCCAATCTTTTGTTAGTATGGTGATTGGAACATGTTGTCATAGTGCACGACTTTAA 1140 0.4333 MGVRKVGKYEVGRTVGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVEQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVRQGRLSENESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPDQGVSLLRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLMAGYLPFDETDLTTLYSKIERAEFSCPSSFPVGAKSLIHRILDPNPETRVRIEEIRNDEWFRRSYVPVRLVEYEDVNLDDVYAVFDDPEDQQTDEQCGNEEMGPLILNAFDLIILSQGLNLSALFDRGQVCLLFIFHSFMFHIWLIGQLLLIPLECRLFMIQSFVSMVIGTCCHSARL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00822 379 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Eupl03g00822 379 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Eupl03g00822 379 Gene3D Transferase(Phosphotransferase) domain 1 3 303 - -
Eupl03g00822 379 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 327 - -
Eupl03g00822 379 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00822 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Eupl03g00822 379 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Eupl03g00822 379 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00822 379 Gene3D Kinase associated domain 1, KA1 304 337 - -
Eupl03g00822 379 Pfam NAF domain 305 329 IPR004041 GO:0007165
Eupl03g00822 379 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Eupl03g00822 379 SUPERFAMILY Protein kinase-like (PK-like) 6 277 IPR011009 -
Eupl03g00822 379 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00822 Eupl-Chr3 29917061 29924467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00822 1 330 CBL-interacting serine-threonine protein kinases AT4G24400 83.636 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Eupl03g00822 Pkinase 1.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00822 - - nnu:104595561 611.683