Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00817 ATGTACAATCATAATAGTCATCCCCGTGATGCAGTGATCGACGTAGTCAAGCCATCGAGTTTTACCGGCGGGCTCGAATTCACTTGCCTAACTTATACAGTCACAAAGAATCAGAAGATCGAGGGGAAATGGAAGAGTGAGGATGTCGACTTGTTGCACCGGATCACTGGGTATGCACCTAAGGGATGTGTCACAGCCGTCATGGGTCCTAGTGGTGCAGGGAAGTCTACGTTCTTGGATGGATTGGCTGGAAGGATTGCAAGTGGTAGCCTCAAGGGTAGGGTGTCATTAGATGGAGGGGAGATGAGCCCAAGCTTGATTAAGCGGACCTCGGCCTACATAATGCAAGATGATCGTCTCTTTCCGATGCTCACCGTCTATGAGACATTGATGTTCGCCGCTGATTTTCGTCTGGGATCGATATCTAGAACTGATAAGAGGCAACGTGTTGAGAAGCTGATTGAGCAACTTGGTTTGGCGTCATCGAGGAACACTTACATAGGCGACGAAGGCACTCGAGGGGTGTCCGGTGGCGAGCGTCGCAGAGTCTCGATCGGGGTGGACATAATCCATGGACCTGCATTGCTCTTCCTTGACGAGCCTACTTCAGGTCTAGACTCCACCAGTGCCCACAGTGTTATCGAAAAGGTGCACGACATAGCCCGTTCGGGCAGCACAGTAATCCTCACCATCCATCAACCCTCACACCGAATTCAACTTCTCCTTGATCACTTGATTATACTCGCACGAGGGCAACTCATGTACCAAGGATCACCAAAAGACGTTACACTCCACCTTGCACGCATGGGTCGAAAAGTCCCACCTGGGGAAAACTCGATAGAGTACCTCATAGACGTGATACAAGAGTATGATCAGTCCGAGCTTGGTGTTGAGGCACTTGCTGATTTTGCCCTTACAGGGATGAAACCACCACCAATCTCTGATGAGGTGTTCTCAATCTCGACGGTCCCCGTGACACCAGTGCTGCCTCCGAGAACGCTTCGGGTGGAAGAACCTAGTGACAAGGGAAGAACTGGGAAGCGTCTCCATCTATCAGTTAACGATTTTGATCATAGTGTAAGGAGCCCTTGGGCATCATCGAAATCACCATGGAGTATAAGCCAGAACAGCGTCTCTGAGATACTGAGGTTTACCCCTTCTCAGCAGCGGACTGATCGAAAAATGCATAATCCGACAAGGCAAGTCTTTCATAAATCGTCTCTTTATTATTAA 1233 0.4947 MYNHNSHPRDAVIDVVKPSSFTGGLEFTCLTYTVTKNQKIEGKWKSEDVDLLHRITGYAPKGCVTAVMGPSGAGKSTFLDGLAGRIASGSLKGRVSLDGGEMSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLGSISRTDKRQRVEKLIEQLGLASSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPALLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSHRIQLLLDHLIILARGQLMYQGSPKDVTLHLARMGRKVPPGENSIEYLIDVIQEYDQSELGVEALADFALTGMKPPPISDEVFSISTVPVTPVLPPRTLRVEEPSDKGRTGKRLHLSVNDFDHSVRSPWASSKSPWSISQNSVSEILRFTPSQQRTDRKMHNPTRQVFHKSSLYY* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00817 410 Pfam ABC transporter 53 203 IPR003439 GO:0005524
Eupl03g00817 410 Gene3D - 38 269 IPR027417 -
Eupl03g00817 410 MobiDBLite consensus disorder prediction 388 410 - -
Eupl03g00817 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 263 IPR027417 -
Eupl03g00817 410 SMART AAA_5 61 259 IPR003593 GO:0016887
Eupl03g00817 410 FunFam ABC transporter G family member 6 35 273 - -
Eupl03g00817 410 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 275 IPR003439 GO:0005524
Eupl03g00817 410 Pfam ABC-2 type transporter 232 289 IPR043926 GO:0140359
Eupl03g00817 410 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Eupl03g00817 410 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00817 Eupl-Chr3 29820932 29822296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00817 48 289 Calmodulin-binding Proteins AT2G36910 25.714 2.26e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00817 K05681 - pvy:116140126 590.882