Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00816 ATGTCTTCTTATATACGTTCTTTGTATCCATGGTGGTGCAGTTCATCTCCAGCGGGCTACTACGCGAACTCTAAGGAGATACTCCCAGTCACTCCAACACCTCATAGCAGTGACTACACTGTCGACGAGAATGACTACCTAACTCCCAATGTTGGTCCTACCTCCATGGCTCGTCACCACCACCTTGGACCCAAGTTTGCAAACTCCTTCTTCTCTGAGATTTTGGTTCTCATGCGCCGCAACTTCATCAACATCCGACGGACACCGGAGCTTTTCCTTTCAAGGCAGATGGTCCTCACATTTATGGGAATCATGATGGCCACAATGTTCTTGCGCCCCAAAAAAGACATGCAAGGAATCACTAATCGCCTTAGCTTCTTCATCTTCACTGTCTGTCTCTTCTTCTTTTCGTCTAACGACGCTGTCCCGGCGTTCATTCAAGAACGCTACATATTTGTTCGCGAGACCTCGCACAATGCCTATCGAGCCTCTTCTTATGCGATCTCCGGCCTCATTACTTACCTACCTTTCCTTGCCGTCCAGGCAGCGACCTATGCCGGTATCGTTTATTTCGCATTGGGTCTTACTGGCCAATTCCCATATTTCTTGATTGTGTTATATGTGTCTCTCCTATCTACCAACTCCTTTGTGGTTTTTGTGAGTTCAGTAGTCCCCAATTATATATTGGGCTATGCTTCTGTCATTGCTTTCACTGCCCTTTTCTTCTTGTTTTGTGGGTACTTCTTGAATAGCCACGACATACCGGGATATTGGCGTTGGATGAACAAGATCTCGACGATGACGTATCCGTATGAAGGGATGCTGATGAATGAATTTCAGACGACAAACATTGTTGGGCAGGACTTTAATGGAAAAGACGTGACGGGGCTTATGATCTTAGATGGTTTGAAAATTGATTACAACGGTTTTGTGAGCTTACAATGTTGTGCATCAGCTAATGTTACTGATCACATAACCAAGATAAACTGGACCTCAGATATCAAGCTGTTCCATAACAACAAGAATTGCCAGAATATCTCTGTTCCCGTGGTGAACGATACAAGCTATAAACGAGCTCGGATTTTCGGCACTGGTTTGGGAAGCAAATGGTGTTATAACTTGACGACGGTTAAGGATCAAGACTACCTAACAAGGGGTACATTCCTTCATGGTCCTATTCTAGCTACTTTGCCGGACACATTTTTCAATGTTTCGATTGGTGTCACACCGATAAGCCGAGTGAGCTCCTCCGTCGACCCGTTGGAGGTGGAGGGCATTTTCAGAGCTACTAATCACTATTTTAACTTCTGCTTATTGAGGGGAAAGGGCAATCCTTACATTTCAAAGCTTGAATTGAGGCCTTTGAATGATTTGCGTTACTTAGGTGCTGATCCATCTAGTGTTCTAAGTGTTGTTGCTAGAGTGGATGTTGGGAACACACAAGGGGTGATCAGGTCTCCAGATGATCCGAACGATCGAATCTGGAACATCACCGATGCAACCACAAGTGCTACTCCAATATCAGCACCCTATGCCAATTTTTCCGGCAGCACCGTACCGATTCGAGTGCTACAAACTGCACTGACTGATACAAAACAGTTGGAATTCCGGCACGACAACCTTGACAAGAGTGATAGCAATTATCTAATCTTCCTCTATTTTCTAGAGCTCAACAGCTCAGTCAAACCGGGTCAAAGGGTATTCGACGTATATGTCAACGGAGAAAAGAAATATGGGAATTTCGATATATTGGGCAATGGCACCACCTCCAATTATAAGGAAATTGTTTTGAATGTTACAGCAAATCGGGTTCTTAATGTGTCCTTGATCAAAGTGTCGGATGGTGTGGAGTTGGGACCTATTTGCAATGCTTACGAGATCTTGCAAGTGCACAAATGGATTGAAGGGACCCTCCAAGAAGATGTTACTGTGTTGCCAACAAACACGGGTAAAGGTGTAAAGAAGTCAATAGATCAAAAAATTATGATCGGCCGAGTAGGTCAATCTGGTGGTGTAGGAGATCTCCTAGTTGATGTAATTGTAGAATTGAGGGATGAGTTGGTGGCGGGAAACTCAGAAAATGAGTTATTGGGCAGTTGGTCTGGAGACCCATGTCTTCCTCTTCCCTGGAAAGGCCTGCACTGTGAACACAGTAAAGATGGATCCGTCGTCATCACTAAGCTGGATCTTTCGTCGAATGGTCTTCAAGGATCATTTCCACCCATCATCACTGAGCTGACCCACTTGAAGGAGCTGAATCTGAGCTTCAATCGCTTTTCTGGGACCATCCCGCCGTTCCCAGCGTCTTCCGTATTGACATCAATGGATGTGAGGCATAATGAACTTATGGGGCCGATTCCAGAATCTCTTGCCTCTCTTAAAAATTTAACAAAATTGTATTTCGGGTGCAACCCTCACTTCAGCAATGATCATCCTTCCAGCTTACTGACCCGGTCAAATCTTTCCACAGACTCTGGAAGATGTGATGGTCAAGGCTCTTCAAATTCATCACAAGGAATATTCATAGGAAGTGTGGCAGCTGGGTCCCTCTTATTCACCATTACAGTTGGAGTCATATTTGTATGCTTTTATAGACAACGGGTATTGGCTCGGAGAAGATTGGGTGTAGGAGAATACCCAATGACAAAGAATGCAGTGTTCTCTATACCCAGCATGGACGACCTTGATGTAAAGTCAATATTCATACAGAACTTTACTCTGGAATGCATTGAAACTGCCACCAGCAAGTACAAAACATTGATAGGTGAAGGGGGCTTTGGATCTGTTTACCGTGGTACTCTACCCGATGGTCAAGATGTGGCTGTGAAGGTTCGGTCAGCCACCTCAAATCAGGGAACTCGTGAATTTGAGAATGAGCTAAACCTTCTCTCAGCTATTCAACATGGGAATTTGGTTCCCCTTCTTGGCTACTGTTGTGAAAGTGATCAACAAATTCTTGTCTATCCTTTCATGTCCAATGGTTCTCTACAAGATCGCCTCTATGGTACTCCTAGTTCTAGTACCAAGGTTTTTATGCTGATCTTTATTGTTATTCTTTCGTTATTGACCATCTGTTTTTTTTCAGGGGAAGCAGCGAAAAGAAAAACTCTCGACTGGCCAACCAGACTTTCCATTGCACTCGGTCTAATGTATCTGCACACATTTGCTGGCCGCTGCGTCATACATAGGGATGTAAAATCAAGCAATATTCTCCTGGATCAAAGCATGTGTGCAAAGGTGGCAGACTTTGGTTTTTCTAAATATGCCCCTCAAGAAGGGGATAGTGGCGCTTCTTTGGAAGTAAGAGGGACTGCTGGATACTTGGATCCAGAGTACTATTCTACCCAGCATTTATCCACGAAAAGCGATGTCTTCAGCTTCGGTGTTGTGCTTCTAGAAATTATTAGCGGTCGGGAGCCTCTCAATATACGTAGACCACGCAATGAGTGGAGCTTAGTCGAATGGGCCAAGCCATTTATTAGGGACTCAAAAATTGAAGAGATCGTGGATCCTAGCATAAAGGGAGGATATCATGCAGAGGCAATGTGGAGAGTGGTAGAGGTAGCATTGGCGTGCATTGAGCCCTTCTCTGCCTACCGACCGTGCATGGTGGACATTGTTCGGGAGCTGGAGGATTCCCTGATCATAGAGAATAACGCATCTGAATACATGAAGTCCATCGACAGCTTTGGTGGCTCAAATCGCTTCTCCTCCGTAGAGAAGAAAATTATTCTTCCAGCCACTCCAACTCCAACAGAACCGTCCCCAATCATCTCACAAACCTTGGCTCCTCCACAACCAAGATAG 3807 0.4479 MSSYIRSLYPWWCSSSPAGYYANSKEILPVTPTPHSSDYTVDENDYLTPNVGPTSMARHHHLGPKFANSFFSEILVLMRRNFINIRRTPELFLSRQMVLTFMGIMMATMFLRPKKDMQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERYIFVRETSHNAYRASSYAISGLITYLPFLAVQAATYAGIVYFALGLTGQFPYFLIVLYVSLLSTNSFVVFVSSVVPNYILGYASVIAFTALFFLFCGYFLNSHDIPGYWRWMNKISTMTYPYEGMLMNEFQTTNIVGQDFNGKDVTGLMILDGLKIDYNGFVSLQCCASANVTDHITKINWTSDIKLFHNNKNCQNISVPVVNDTSYKRARIFGTGLGSKWCYNLTTVKDQDYLTRGTFLHGPILATLPDTFFNVSIGVTPISRVSSSVDPLEVEGIFRATNHYFNFCLLRGKGNPYISKLELRPLNDLRYLGADPSSVLSVVARVDVGNTQGVIRSPDDPNDRIWNITDATTSATPISAPYANFSGSTVPIRVLQTALTDTKQLEFRHDNLDKSDSNYLIFLYFLELNSSVKPGQRVFDVYVNGEKKYGNFDILGNGTTSNYKEIVLNVTANRVLNVSLIKVSDGVELGPICNAYEILQVHKWIEGTLQEDVTVLPTNTGKGVKKSIDQKIMIGRVGQSGGVGDLLVDVIVELRDELVAGNSENELLGSWSGDPCLPLPWKGLHCEHSKDGSVVITKLDLSSNGLQGSFPPIITELTHLKELNLSFNRFSGTIPPFPASSVLTSMDVRHNELMGPIPESLASLKNLTKLYFGCNPHFSNDHPSSLLTRSNLSTDSGRCDGQGSSNSSQGIFIGSVAAGSLLFTITVGVIFVCFYRQRVLARRRLGVGEYPMTKNAVFSIPSMDDLDVKSIFIQNFTLECIETATSKYKTLIGEGGFGSVYRGTLPDGQDVAVKVRSATSNQGTREFENELNLLSAIQHGNLVPLLGYCCESDQQILVYPFMSNGSLQDRLYGTPSSSTKVFMLIFIVILSLLTICFFSGEAAKRKTLDWPTRLSIALGLMYLHTFAGRCVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYLDPEYYSTQHLSTKSDVFSFGVVLLEIISGREPLNIRRPRNEWSLVEWAKPFIRDSKIEEIVDPSIKGGYHAEAMWRVVEVALACIEPFSAYRPCMVDIVRELEDSLIIENNASEYMKSIDSFGGSNRFSSVEKKIILPATPTPTEPSPIISQTLAPPQPR* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00816 1268 Gene3D Ribonuclease Inhibitor 678 834 IPR032675 -
Eupl03g00816 1268 SUPERFAMILY Protein kinase-like (PK-like) 897 1210 IPR011009 -
Eupl03g00816 1268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1060 1072 IPR008271 GO:0004672|GO:0006468
Eupl03g00816 1268 FunFam Leucine-rich repeat receptor-like kinase 676 807 - -
Eupl03g00816 1268 Pfam Protein tyrosine and serine/threonine kinase 918 1209 IPR001245 GO:0004672|GO:0006468
Eupl03g00816 1268 Gene3D Phosphorylase Kinase; domain 1 887 990 - -
Eupl03g00816 1268 ProSitePatterns Protein kinases ATP-binding region signature. 921 943 IPR017441 GO:0005524
Eupl03g00816 1268 MobiDBLite consensus disorder prediction 1248 1268 - -
Eupl03g00816 1268 PANTHER OS07G0107800 PROTEIN-RELATED 311 1214 - -
Eupl03g00816 1268 MobiDBLite consensus disorder prediction 1249 1268 - -
Eupl03g00816 1268 Pfam Malectin-like domain 315 630 IPR024788 -
Eupl03g00816 1268 SUPERFAMILY L domain-like 699 821 - -
Eupl03g00816 1268 CDD STKc_IRAK 921 1211 - -
Eupl03g00816 1268 ProSiteProfiles Protein kinase domain profile. 915 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00816 1268 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 893 990 - -
Eupl03g00816 1268 Gene3D Transferase(Phosphotransferase) domain 1 991 1229 - -
Eupl03g00816 1268 SMART serkin_6 915 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00816 1268 Gene3D - 469 631 - -
Eupl03g00816 1268 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 1020 1223 - -
Eupl03g00816 1268 Pfam ABC-2 type transporter 73 279 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00816 Eupl-Chr3 29799133 29820029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00816 310 1217 Receptor kinase-like Gene Family AT1G67720 33.015 1.19e-122 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl03g00816 Malectin_like 6.6e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00816 - - csin:114271567 1155.2